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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 1
  • peroxisome 5
  • plasma membrane 1
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:cytosol, peroxisome, plasma membrane
BaCelLo:cytosol
EpiLoc:peroxisome
MultiLoc:peroxisome
Plant-mPloc:peroxisome
PProwler:peroxisome
WoLF PSORT:plasma membrane
YLoc:peroxisome
 nucleus: 21132161
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH39301 Soybean endoplasmic reticulum, mitochondrion, nucleus 96.41 96.41
Solyc07g019670.2.1 Tomato plastid 76.8 76.9
VIT_11s0016g03690.t01 Wine grape peroxisome 76.24 76.24
Solyc12g007170.1.1 Tomato plastid 76.24 76.24
PGSC0003DMT400001017 Potato cytosol 76.24 76.24
AT4G29010.1 Thale cress peroxisome 72.38 72.68
CDY35240 Canola peroxisome 72.38 72.58
Bra011076.1-P Field mustard peroxisome 72.24 72.44
CDX97462 Canola peroxisome 71.96 72.26
CDY06852 Canola peroxisome 71.96 72.16
CDY66477 Canola peroxisome 71.82 72.12
CDY69211 Canola mitochondrion, peroxisome 59.94 71.15
GSMUA_Achr7P14420_001 Banana peroxisome 70.44 70.34
Bra010347.1-P Field mustard peroxisome 71.27 70.3
EES04919 Sorghum peroxisome 69.34 69.05
Os02t0274100-01 Rice plasma membrane 68.09 67.91
HORVU3Hr1G013880.1 Barley peroxisome 68.23 67.86
TraesCS6D01G116200.1 Wheat golgi, peroxisome 67.96 67.77
TraesCS6A01G125800.1 Wheat golgi 67.82 67.63
TraesCS6B01G153900.1 Wheat peroxisome 67.68 67.49
TraesCS3D01G077200.1 Wheat peroxisome 67.82 67.26
HORVU6Hr1G024100.1 Barley peroxisome 66.99 66.8
TraesCS3A01G077000.3 Wheat peroxisome 67.96 66.13
Bra024170.1-P Field mustard peroxisome 67.27 66.08
TraesCS3B01G091200.1 Wheat endoplasmic reticulum, vacuole 63.12 65.95
GSMUA_Achr8P19760_001 Banana peroxisome 66.3 65.66
Zm00001d053308_P009 Maize peroxisome 68.78 64.76
CDX92908 Canola peroxisome 67.13 61.75
KRH02269 Soybean peroxisome 57.32 57.4
KRH50818 Soybean nucleus 57.32 57.32
KRH02268 Soybean nucleus 56.63 56.79
KRH25463 Soybean extracellular 6.22 52.94
KRH50819 Soybean cytosol, extracellular, peroxisome 5.11 51.39
KRG94502 Soybean peroxisome 16.44 51.29
Zm00001d015992_P001 Maize peroxisome 67.96 40.93
KRH55235 Soybean peroxisome 9.94 28.92
KRH50718 Soybean plastid 6.22 27.11
KRH55427 Soybean nucleus 11.88 26.96
KRH57489 Soybean mitochondrion 10.36 24.35
KRH02364 Soybean peroxisome 8.7 23.77
KRH04196 Soybean mitochondrion 10.22 23.57
KRH50717 Soybean mitochondrion, peroxisome 3.59 22.41
KRH66641 Soybean peroxisome 8.01 21.25
KRH45650 Soybean nucleus 9.67 20.65
KRG99357 Soybean nucleus 9.53 20.47
Protein Annotations
KEGG:00062+4.2.1.17+1.1.1.35KEGG:00071+4.2.1.17+1.1.1.35KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8KEGG:00120+1.1.1.35KEGG:00280+4.2.1.17+1.1.1.35KEGG:00281+4.2.1.17+1.1.1.35
KEGG:00310+4.2.1.17+1.1.1.35KEGG:00360+4.2.1.17KEGG:00362+4.2.1.17+1.1.1.35KEGG:00380+4.2.1.17+1.1.1.35KEGG:00410+4.2.1.17KEGG:00592+4.2.1.17
KEGG:00623+1.1.1.35KEGG:00627+4.2.1.17KEGG:00640+4.2.1.17KEGG:00650+4.2.1.17+1.1.1.35KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00720+4.2.1.17+1.1.1.35
KEGG:00903+4.2.1.17KEGG:00930+4.2.1.17+1.1.1.35Gene3D:1.10.1040.50EntrezGene:100780325InterPro:3-OHacyl-CoA_DH_NAD-bdGene3D:3.40.50.720
Gene3D:3.90.226.10InterPro:3HC_DH_CMapMan:5.7.3.2.2InterPro:6-PGluconate_DH-like_C_sfEMBL:ACUP02004225InterPro:AIM1
InterPro:ClpP/crotonase-like_dom_sfInterPro:Enoyl-CoA_hyd/isom_CSInterPro:Enoyl-CoA_hydra/isoEnsemblPlantsGene:GLYMA_07G085200GO:GO:0003674GO:GO:0003824
GO:GO:0003857GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005777
GO:GO:0006629GO:GO:0006631GO:GO:0006635GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0016491GO:GO:0055114UniProt:I1KIP9EnsemblPlants:KRH48371ProteinID:KRH48371
ProteinID:KRH48371.1InterPro:NAD(P)-bd_dom_sfPFAM:PF00378PFAM:PF00725PFAM:PF02737ScanProsite:PS00166
PANTHER:PTHR23309PANTHER:PTHR23309:SF10MetaCyc:PWY-1361MetaCyc:PWY-5109MetaCyc:PWY-5136MetaCyc:PWY-5137
MetaCyc:PWY-5138MetaCyc:PWY-5177MetaCyc:PWY-5789MetaCyc:PWY-6435MetaCyc:PWY-6583MetaCyc:PWY-6837
MetaCyc:PWY-6863MetaCyc:PWY-6883MetaCyc:PWY-6944MetaCyc:PWY-6945MetaCyc:PWY-6946MetaCyc:PWY-7007
MetaCyc:PWY-7046MetaCyc:PWY-7094MetaCyc:PWY-7216MetaCyc:PWY-7291MetaCyc:PWY-735MetaCyc:PWY-7401
MetaCyc:PWY-7606MetaCyc:PWY-7654MetaCyc:PWY-7656MetaCyc:PWY-7726MetaCyc:PWY-7778MetaCyc:PWY-7779
MetaCyc:PWY-81SUPFAM:SSF48179SUPFAM:SSF51735SUPFAM:SSF52096TMHMM:TMhelixUniParc:UPI000233836B
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr7:+:7845887..7852685
Molecular Weight (calculated)
78130.0 Da
IEP (calculated)
9.796
GRAVY (calculated)
0.133
Length
724 amino acids
Sequence
(BLAST)
001: MALPKVDFEV GTDGVAVITM CNPPVNALAI PIIMGLKNRF DEAARRNDVK AIVLTGKGGR FSGGFDISVM QKVHQTGDSS HLPDVSVELV VNSIEDSKKP
101: VVAAVEGLAL GGGLELAMGC HARVAAPRAQ LGLPELTLGI IPGFGGTQRL PRLIGLSKAV EMMLTSKPIT SEEGRKFGLI DAIVSSEELL KASRLWALEI
201: GERRKPWIRS LHRTDKIGSL SEARAVLKTA RQQVKKTAPH LPQQQACVDV IEHGIVHGGY SGVLKEAEVF KQLVISDTSK GLINVFFAQR AISKVPGVTD
301: IGLKPRNVKK AAVIGGGLMG SGIATALILG NIRVILKEIN SEFLLKGIKT IEANVNGLVR RGKLTKQKAD AALSLLKGVL DYSEFKDVDL VIEAVIENIS
401: LKQTIFGDLE KICPPHCILA SNTSTIDLDV VGKTTSSQDR IAGAHFFSPA HIMPLLEIIR TDKTSAQVIV DLITVGKIIK KAPVVVGNCT GFAVNKTFFP
501: YSQGAHLLVN LGVDVFRIDR LICNFGFPIG PFQLQDLAGY GVAVATSKVF ADAFSDRIFK SPLLDLLIKS GRNGKNNGKG YYIYEKGGKP KPDPSILPII
601: EESRRLCNIM PNGKPISITD QEIVEMILFP VVNEACRVLE DGVVIRASDL DIASVLGMSF PNYRGGIVFW ADLVGANHIF TSLKKWAQLY GNFYKPSRYL
701: EERALKGIPL SAPASSTPKS MARL
Best Arabidopsis Sequence Match ( AT4G29010.1 )
(BLAST)
001: MAKKIGVTME VGNDGVAVIT ISNPPVNSLA SPIISGLKEK FRDANQRNDV KAIVLIGNNG RFSGGFDINV FQQVHKTGDL SLMPEVSVEL VCNLMEDSRK
101: PVVAAVEGLA LGGGLELAMA CHARVAAPKA QLGLPELTLG VIPGFGGTQR LPRLVGLAKA TDMILLSKSI SSEEGHKLGL IDALVPPGDV LSTSRKWALD
201: IAEGRKPFLQ SLHRTDKIGS LSEARAILKN SRQLAKKIAP NMPQHHACIE VIEEGIIHGG YSGVLKEAEV FKQLVLSDTA KGLVHVFFAQ RATSKVPNVT
301: DVGLKPRPIK KVAVIGGGLM GSGIATALLL SNIRVVLKEI NSEFLMKGIK SVEANMKSLV SRGKLTQDKA GKALSLFKGV LDYTEFNDVD MVIEAVIENI
401: QLKQNIFKEI EKVCSPHCIL ASNTSTIDLD VIGEKTNSKD RIVGAHFFSP AHLMPLLEIV RSKNTSAQVI LDLMAVGKAI KKVPVVVGNC IGFAVNRTFF
501: PYSQAAHMLA NLGVDLFRID SVITSFGLPL GPFQLGDLAG HGIGLAVGPI YAKVYGDRMF RSPMTELLLK SGRNGKINGR GYYIYEKGSK PKPDPSVLSI
601: VEKSRKLTNI MPGGKPISVT DKEIVEMILF PVVNEACRVL DEGVVIRASD LDIASVLGMS FPSYRGGIVF WADTVGPKYI YERLKKLSET YGSFFKPSRY
701: LEERAMNGML LSESKSSRSK L
Arabidopsis Description
AIM1Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI6]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.