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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome, mitochondrion

Predictor Summary:
  • cytosol 1
  • mitochondrion 2
  • peroxisome 2
Predictors GFP MS/MS Papers
Winner Takes All:mitochondrion, peroxisome
Any Predictor:cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:peroxisome
PProwler:peroxisome
YLoc:mitochondrion
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra024170.1-P Field mustard peroxisome 99.84 82.63
CDY66477 Canola peroxisome 90.16 76.28
CDX97462 Canola peroxisome 89.84 76.01
CDY35240 Canola peroxisome 89.02 75.21
CDY06852 Canola peroxisome 89.02 75.21
CDX92908 Canola peroxisome 95.41 73.95
AT4G29010.1 Thale cress peroxisome 87.38 73.93
Solyc12g007170.1.1 Tomato plastid 72.62 61.19
PGSC0003DMT400001017 Potato cytosol 72.46 61.05
VIT_11s0016g03690.t01 Wine grape peroxisome 71.97 60.64
Solyc07g019670.2.1 Tomato plastid 71.31 60.17
KRH48371 Soybean nucleus 71.15 59.94
KRH39301 Soybean endoplasmic reticulum, mitochondrion, nucleus 70.16 59.12
GSMUA_Achr7P14420_001 Banana peroxisome 68.52 57.66
TraesCS3B01G091200.1 Wheat endoplasmic reticulum, vacuole 65.08 57.29
EES04919 Sorghum peroxisome 67.38 56.53
TraesCS6D01G116200.1 Wheat golgi, peroxisome 67.05 56.34
TraesCS6A01G125800.1 Wheat golgi 67.05 56.34
TraesCS6B01G153900.1 Wheat peroxisome 66.89 56.2
Os02t0274100-01 Rice plasma membrane 66.39 55.79
HORVU3Hr1G013880.1 Barley peroxisome 66.23 55.49
HORVU6Hr1G024100.1 Barley peroxisome 65.9 55.37
TraesCS3D01G077200.1 Wheat peroxisome 65.57 54.79
GSMUA_Achr8P19760_001 Banana peroxisome 65.41 54.58
TraesCS3A01G077000.3 Wheat peroxisome 65.9 54.03
Zm00001d053308_P009 Maize peroxisome 66.07 52.41
CDY34924 Canola peroxisome 56.72 47.59
CDX74076 Canola peroxisome 56.23 47.25
CDY08028 Canola peroxisome 56.07 47.11
CDY24662 Canola peroxisome 55.57 46.69
CDY05296 Canola peroxisome 55.41 46.62
Zm00001d015992_P001 Maize peroxisome 66.39 33.69
CDX98542 Canola peroxisome 13.77 28.97
CDX97647 Canola peroxisome 13.77 26.67
CDY67750 Canola mitochondrion 7.38 14.95
CDY09705 Canola cytosol, mitochondrion, peroxisome 5.9 13.9
CDX90535 Canola peroxisome 5.9 13.9
CDY43605 Canola peroxisome 5.74 12.68
CDY32958 Canola peroxisome 5.74 12.68
CDY47214 Canola cytosol, mitochondrion, peroxisome 6.23 11.52
CDY53045 Canola cytosol, mitochondrion, peroxisome 6.23 11.24
Protein Annotations
KEGG:00062+4.2.1.17+1.1.1.35KEGG:00071+4.2.1.17+1.1.1.35KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8KEGG:00120+1.1.1.35KEGG:00280+4.2.1.17+1.1.1.35KEGG:00281+4.2.1.17+1.1.1.35
KEGG:00310+4.2.1.17+1.1.1.35KEGG:00360+4.2.1.17KEGG:00362+4.2.1.17+1.1.1.35KEGG:00380+4.2.1.17+1.1.1.35KEGG:00410+4.2.1.17KEGG:00592+4.2.1.17
KEGG:00623+1.1.1.35KEGG:00627+4.2.1.17KEGG:00640+4.2.1.17KEGG:00650+4.2.1.17+1.1.1.35KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00720+4.2.1.17+1.1.1.35
KEGG:00903+4.2.1.17KEGG:00930+4.2.1.17+1.1.1.35Gene3D:1.10.1040.50InterPro:3-OHacyl-CoA_DH_NAD-bdGene3D:3.40.50.720Gene3D:3.90.226.10
InterPro:3HC_DH_CMapMan:5.7.3.2.2InterPro:6-PGluconate_DH-like_C_sfGO:A0A078JUD8UniProt:A0A078JUD8InterPro:AIM1
EnsemblPlants:CDY69211ProteinID:CDY69211ProteinID:CDY69211.1InterPro:ClpP/crotonase-like_dom_sfInterPro:Enoyl-CoA_hydra/isoGO:GO:0003674
GO:GO:0003824GO:GO:0003857GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737
GO:GO:0005777GO:GO:0006629GO:GO:0006631GO:GO:0006635GO:GO:0008150GO:GO:0008152
GO:GO:0009056GO:GO:0009987GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:GSBRNA2T00084204001InterPro:NAD(P)-bd_dom_sf
PFAM:PF00378PFAM:PF00725PFAM:PF02737PANTHER:PTHR23309PANTHER:PTHR23309:SF10MetaCyc:PWY-1361
MetaCyc:PWY-5109MetaCyc:PWY-5136MetaCyc:PWY-5137MetaCyc:PWY-5138MetaCyc:PWY-5177MetaCyc:PWY-5789
MetaCyc:PWY-6435MetaCyc:PWY-6583MetaCyc:PWY-6837MetaCyc:PWY-6863MetaCyc:PWY-6883MetaCyc:PWY-6944
MetaCyc:PWY-6945MetaCyc:PWY-6946MetaCyc:PWY-7007MetaCyc:PWY-7046MetaCyc:PWY-7094MetaCyc:PWY-7216
MetaCyc:PWY-7291MetaCyc:PWY-735MetaCyc:PWY-7401MetaCyc:PWY-7606MetaCyc:PWY-7726SUPFAM:SSF48179
SUPFAM:SSF51735SUPFAM:SSF52096UniPathway:UPA00659UniParc:UPI0004EE49F3::
Description
BnaCnng62430DBnaCnng62430D protein (Fragment) [Source:UniProtKB/TrEMBL;Acc:A0A078JUD8]
Coordinates
chrLK038876:-:1127..4430
Molecular Weight (calculated)
66663.1 Da
IEP (calculated)
9.748
GRAVY (calculated)
0.085
Length
610 amino acids
Sequence
(BLAST)
001: GGGFELALAS HARVAAPKAQ LSLPELTLGL IPGFGGTQRL PRLVGLAKAI DMILLSKSIS SEEGHKLGLI DALVPPGELL STSRKWALDI ALGRKPFLRS
101: LYRTDKIGSL SEARAILKNA RQLAKKIAPN MPQHHVCIDV IEEGIIHGGY SGILKEGEVF KQLIPSDTVK ALVHVYFAQR AISKVPNVTD VGLKPRHMKK
201: VAVIGGGLMG SGIATALLLS NIRVVIKEIN SEYLLKGIKS IEANLNSLVS RGKMTQDKAG EAFSLLKGVL DYTEFKDVDM VIEAVIENIE LKQNIFKEIE
301: EVCPPHCILA SNTSTIDLNV IGEKTNSKDR IVGAHFFSPA HIMTLLEIVR TENTSPRVIL DLMALGKTIK KVPVVVGNCI GFTVNRTFFP YAQAAHMLVN
401: LGVDLFRVDS VITSFGLPLG PFMLGDLAGH GIAIATKDIY DKAFGDRMFR SPLTELLLKS GRNGKINGRG YYIYQKGSKP KPDPSVLSVV EESRRLTNIM
501: PGGKPITVTD KEIVEMILFP VVNEACRVLD EGVVIRASDL DVASVLGMSF PSYRGGVLFW ADTVGPKYIY ERLKRLSETY GDFFKPSKYL EEMAMRGMLL
601: SDPKSSRSRL
Best Arabidopsis Sequence Match ( AT3G06860.1 )
(BLAST)
001: MDSRTKGKTV MEVGGDGVAV ITLINPPVNS LSFDVLYNLK SNYEEALSRN DVKAIVITGA KGRFSGGFDI SGFGEMQKGN VKEPKAGYIS IDIITDLLEA
101: ARKPSVAAID GLALGGGLEL AMACHARISA PAAQLGLPEL QLGVIPGFGG TQRLPRLVGL TKALEMILTS KPVKAEEGHS LGLIDAVVPP AELVTTARRW
201: ALDIVGRRKP WVSSVSKTDK LPPLGEAREI LTFAKAQTLK RAPNMKHPLM CLDAIEVGIV SGPRAGLEKE AEVASQVVKL DTTKGLIHVF FSQRGTAKVP
301: GVTDRGLVPR KIKKVAIIGG GLMGSGIATA LILSNYPVIL KEVNEKFLEA GIGRVKANLQ SRVRKGSMSQ EKFEKTMSLL KGSLDYESFR DVDMVIEAVI
401: ENISLKQQIF ADLEKYCPQH CILASNTSTI DLNKIGERTK SQDRIVGAHF FSPAHIMPLL EIVRTNHTSA QVIVDLLDVG KKIKKTPVVV GNCTGFAVNR
501: MFFPYTQAAM FLVECGADPY LIDRAISKFG MPMGPFRLCD LVGFGVAIAT ATQFIENFSE RTYKSMIIPL MQEDKRAGEA TRKGFYLYDD KRKAKPDPEL
601: KKYIEKARSI SGVKLDPKLA NLSEKDIIEM TFFPVVNEAC RVFAEGIAVK AADLDIAGIM GMGFPPYRGG IMFWADSIGS KYIYSRLDEW SKAYGEFFKP
701: CAFLAERGSK GVLLSAPVKQ ASSRL
Arabidopsis Description
MFP2Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI5]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.