CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
AT4G16800.1	Thale cress	mitochondrion	88.7	88.7
VIT_02s0234g00080.t01	Wine grape	mitochondrion	65.78	67.12
KRH57489	Soybean	mitochondrion	63.12	61.69
Os02t0654100-01	Rice	mitochondrion	60.13	60.33
HORVU6Hr1G062260.3	Barley	plastid	57.81	60.0
KRH04196	Soybean	mitochondrion	62.46	59.87
PGSC0003DMT400067466	Potato	mitochondrion	61.79	59.81
OQU85735	Sorghum	mitochondrion	59.47	59.27
Os02t0654000-01	Rice	mitochondrion	57.81	59.18
Solyc08g078130.2.1	Tomato	mitochondrion	61.13	59.16
Zm00001d017459_P002	Maize	mitochondrion	59.47	59.08
GSMUA_Achr5P18330_001	Banana	mitochondrion	60.47	58.33
OQU85737	Sorghum	mitochondrion	57.48	56.72
TraesCS6D01G224900.1	Wheat	mitochondrion	58.14	56.63
TraesCS6B01G281600.2	Wheat	mitochondrion	58.8	56.55
TraesCS6B01G281700.1	Wheat	mitochondrion	56.15	55.96
HORVU6Hr1G062320.2	Barley	mitochondrion	55.15	54.97
Zm00001d017458_P003	Maize	mitochondrion	57.14	52.92
TraesCS6D01G224800.1	Wheat	mitochondrion	41.53	51.02
Bra021079.1-P	Field mustard	nucleus	97.34	37.71
CDX90535	Canola	peroxisome	22.59	26.25
CDY09705	Canola	cytosol, mitochondrion, peroxisome	22.59	26.25
CDY32958	Canola	peroxisome	22.92	25.0
CDY43605	Canola	peroxisome	22.59	24.64
CDY47214	Canola	cytosol, mitochondrion, peroxisome	25.58	23.33
CDY53045	Canola	cytosol, mitochondrion, peroxisome	25.91	23.08
CDY34924	Canola	peroxisome	26.25	10.87
CDY05296	Canola	peroxisome	25.91	10.76
CDY24662	Canola	peroxisome	25.91	10.74
CDY08028	Canola	peroxisome	25.91	10.74
CDX74076	Canola	peroxisome	25.58	10.61
CDY06852	Canola	peroxisome	24.58	10.25
CDY35240	Canola	peroxisome	24.58	10.25
CDX97462	Canola	peroxisome	23.59	9.85
CDY66477	Canola	peroxisome	23.26	9.71
CDX92908	Canola	peroxisome	21.59	8.26
CDY69211	Canola	mitochondrion, peroxisome	14.95	7.38
CDX98542	Canola	peroxisome	4.98	5.17
CDX97647	Canola	peroxisome	4.98	4.76

Protein Annotations

Gene3D:1.10.12.10	Gene3D:3.90.226.10	MapMan:4.2.7.5.3	GO:A0A078JMT0	UniProt:A0A078JMT0	EnsemblPlants:CDY67750
ProteinID:CDY67750	ProteinID:CDY67750.1	InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hyd/isom_CS	InterPro:Enoyl-CoA_hydra/iso	InterPro:Enoyl-CoA_hydra_C
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	EnsemblPlantsGene:GSBRNA2T00066137001	InterPro:IPR014748
PFAM:PF00378	ScanProsite:PS00166	PANTHER:PTHR11941	PANTHER:PTHR11941:SF129	SUPFAM:SSF52096	UniParc:UPI00019D33F2

Description

BnaC08g48260DBnaC08g48260D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JMT0]

Coordinates

chrLK036473:-:5902..8066

Molecular Weight (calculated)

32718.0 Da

IEP (calculated)

9.258

GRAVY (calculated)

-0.081

Length

301 amino acids

Sequence
(BLAST)

001: MSFVKYLRRD SLLQLAGKRS LSRSCMLQTC RTLIIETAPP ESVKLNRLSG SDSGIVEVNL DRSVAKNSIN KEMLKGLQTT FETIHHDSSA RVVMITSLVP
101: GVFCAGADLK ERRTMSPSEV HTYVNSLRYM FSFIEALSIP TIAAIEGVAL GGGLEMALSC DLRICGENAV FGLPETGLAV IPGAGGTQRL SRLVGRSVSK
201: ELIFTGRKID AREAAKKGLV NFCVAAGEAH KKAMEVAQQI NNKGPMAIKM AKKAIDEGIE TNMASGLELE EMCYQKLLNT EDRLEGLAAF AEKRKPRYTG
301: K

Best Arabidopsis Sequence Match ( AT4G16800.1 )
(BLAST)

001: MSFVKYLRRD NLLQLAGKPS LSRNYILQTC RTLIIETSPP EFVKLNRLSG SDSGIIEVNL DRPVTKNAIN KEMLKSLQNA FESIHQDNSA RVVMIRSLVP
101: GVFCAGADLK ERRTMSPSEV HTYVNSLRYM FSFIEALSIP TIAAIEGAAL GGGLEMALAC DLRICGENAV FGLPETGLAI IPGAGGTQRL SRLVGRSVSK
201: ELIFTGRKID AIEAANKGLV NICVTAGEAH EKAIEMAQQI NEKGPLAIKM AKKAIDEGIE TNMASGLEVE EMCYQKLLNT QDRLEGLAAF AEKRKPLYTG
301: N

Arabidopsis Description

Probable enoyl-CoA hydratase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JML5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.