Factsheet for VIT_02s0234g00080.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400067466	Potato	mitochondrion	72.88	69.13
Solyc08g078130.2.1	Tomato	mitochondrion	72.2	68.49
KRH57489	Soybean	mitochondrion	69.83	66.88
CDY67750	Canola	mitochondrion	67.12	65.78
AT4G16800.1	Thale cress	mitochondrion	66.44	65.12
GSMUA_Achr5P18330_001	Banana	mitochondrion	68.81	65.06
KRH04196	Soybean	mitochondrion	68.81	64.65
HORVU6Hr1G062260.3	Barley	plastid	62.03	63.1
Os02t0654100-01	Rice	mitochondrion	64.07	63.0
OQU85735	Sorghum	mitochondrion	63.73	62.25
Zm00001d017459_P002	Maize	mitochondrion	63.05	61.39
Os02t0654000-01	Rice	mitochondrion	60.0	60.2
OQU85737	Sorghum	mitochondrion	61.69	59.67
TraesCS6D01G224900.1	Wheat	mitochondrion	62.37	59.55
TraesCS6B01G281600.2	Wheat	mitochondrion	62.71	59.11
TraesCS6B01G281700.1	Wheat	mitochondrion	60.34	58.94
HORVU6Hr1G062320.2	Barley	mitochondrion	58.98	57.62
Zm00001d017458_P003	Maize	mitochondrion	59.66	54.15
TraesCS6D01G224800.1	Wheat	mitochondrion	42.37	51.02
VIT_01s0146g00270.t01	Wine grape	peroxisome	26.44	28.36
VIT_05s0077g00860.t01	Wine grape	peroxisome, plastid	23.73	26.32
Bra021079.1-P	Field mustard	nucleus	67.46	25.61
VIT_01s0127g00420.t01	Wine grape	mitochondrion	23.39	20.54
VIT_05s0077g02140.t01	Wine grape	peroxisome	27.46	11.19
VIT_11s0016g03690.t01	Wine grape	peroxisome	24.07	9.81
VIT_19s0014g02370.t01	Wine grape	peroxisome	5.76	5.74

Protein Annotations

Gene3D:1.10.12.10	EntrezGene:100259474	wikigene:100259474	Gene3D:3.90.226.10	MapMan:4.2.7.5.3	ProteinID:CCB50071
ProteinID:CCB50071.1	InterPro:ClpP/crotonase-like_dom_sf	ncoils:Coil	InterPro:Enoyl-CoA_hyd/isom_CS	InterPro:Enoyl-CoA_hydra/iso	InterPro:Enoyl-CoA_hydra_C
UniProt:F6HCX6	EMBL:FN595528	GO:GO:0003674	GO:GO:0003824	GO:GO:0004300	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005739	GO:GO:0006629	GO:GO:0006635
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	InterPro:IPR014748	EntrezGene:LOC100259474
wikigene:LOC100259474	PFAM:PF00378	ScanProsite:PS00166	PANTHER:PTHR11941	PANTHER:PTHR11941:SF129	SUPFAM:SSF52096
TIGR:TC61406	UniParc:UPI0002109E0E	ArrayExpress:VIT_02s0234g00080	EnsemblPlantsGene:VIT_02s0234g00080	EnsemblPlants:VIT_02s0234g00080.t01	unigene:Vvi.4894
RefSeq:XP_002267334	RefSeq:XP_002267334.2	RefSeq:XP_010657894.1	SEG:seg	:	:

Description

No Description!

Coordinates

chr2:+:98779..103525

Molecular Weight (calculated)

32188.9 Da

IEP (calculated)

6.931

GRAVY (calculated)

-0.066

Length

295 amino acids

Sequence
(BLAST)

001: MGVFAISLYH HCRRNFSFNY HYQSCRTLIL QSAFESVRVQ RLSHDDSGIV EVHLDRPEAK NAIGKEMLGG LQNIFEAINR DASANVVMLS SSVPRVFCAG
101: ADLKERKTMN PSETRFFVNS LRSTFSLLEA LHVPTIAVIE GAALGGGLEM ALSCDLRICG EDAVLGLPET GLAIIPGAGG TQRLSRLVGK SIAKELIFTG
201: RKVGGRDAMS VGLVNYCVPA GEAHLKALEI AQHINQKGPL ALQMAKRAIN EGLELDMESA LALEEECYEQ LLNTKDRLEG LAAFSEKRKP RYNGE

Best Arabidopsis Sequence Match ( AT4G16800.1 )
(BLAST)

001: MSFVKYLRRD NLLQLAGKPS LSRNYILQTC RTLIIETSPP EFVKLNRLSG SDSGIIEVNL DRPVTKNAIN KEMLKSLQNA FESIHQDNSA RVVMIRSLVP
101: GVFCAGADLK ERRTMSPSEV HTYVNSLRYM FSFIEALSIP TIAAIEGAAL GGGLEMALAC DLRICGENAV FGLPETGLAI IPGAGGTQRL SRLVGRSVSK
201: ELIFTGRKID AIEAANKGLV NICVTAGEAH EKAIEMAQQI NEKGPLAIKM AKKAIDEGIE TNMASGLEVE EMCYQKLLNT QDRLEGLAAF AEKRKPLYTG
301: N

Arabidopsis Description

Probable enoyl-CoA hydratase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JML5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.