Factsheet for GSMUA_Achr5P18330_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
mitochondrion 7
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
HORVU6Hr1G062260.3	Barley	plastid	64.74	69.66
VIT_02s0234g00080.t01	Wine grape	mitochondrion	65.06	68.81
OQU85735	Sorghum	mitochondrion	65.71	67.88
Os02t0654100-01	Rice	mitochondrion	65.06	67.67
TraesCS6D01G224900.1	Wheat	mitochondrion	65.38	66.02
Zm00001d017459_P002	Maize	mitochondrion	64.1	66.01
Os02t0654000-01	Rice	mitochondrion	62.18	65.99
TraesCS6B01G281600.2	Wheat	mitochondrion	66.03	65.81
TraesCS6B01G281700.1	Wheat	mitochondrion	62.18	64.24
OQU85737	Sorghum	mitochondrion	62.18	63.61
HORVU6Hr1G062320.2	Barley	mitochondrion	60.9	62.91
PGSC0003DMT400067466	Potato	mitochondrion	62.18	62.38
Solyc08g078130.2.1	Tomato	mitochondrion	62.18	62.38
KRH57489	Soybean	mitochondrion	60.58	61.36
AT4G16800.1	Thale cress	mitochondrion	58.97	61.13
CDY67750	Canola	mitochondrion	58.33	60.47
KRH04196	Soybean	mitochondrion	59.94	59.55
Zm00001d017458_P003	Maize	mitochondrion	59.94	57.54
TraesCS6D01G224800.1	Wheat	mitochondrion	44.23	56.33
GSMUA_Achr11P...	Banana	mitochondrion, peroxisome, plasma membrane	23.08	27.38
GSMUA_Achr7P22470_001	Banana	peroxisome	25.32	27.34
GSMUA_Achr8P10700_001	Banana	mitochondrion, peroxisome, plastid	22.76	26.89
Bra021079.1-P	Field mustard	nucleus	59.94	24.07
GSMUA_Achr4P07800_001	Banana	mitochondrion	23.4	21.79
GSMUA_Achr4P07830_001	Banana	cytosol, mitochondrion, peroxisome	9.94	15.58
GSMUA_Achr2P01720_001	Banana	peroxisome	24.04	10.42
GSMUA_Achr3P24070_001	Banana	cytosol, peroxisome, plastid	23.4	10.2
GSMUA_Achr7P14420_001	Banana	peroxisome	22.76	9.79
GSMUA_Achr8P19760_001	Banana	peroxisome	22.12	9.44
GSMUA_Achr9P20010_001	Banana	peroxisome	4.81	5.03

Protein Annotations

EnsemblPlants:GSMUA_Achr5P18330_001	EnsemblPlants:GSMUA_Achr5T18330_001	EnsemblPlantsGene:GSMUA_Achr5G18330_001	Gene3D:1.10.12.10	Gene3D:3.90.226.10	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hyd/isom_CS	InterPro:Enoyl-CoA_hydra/iso
InterPro:Enoyl-CoA_hydra_C	InterPro:IPR014748	PANTHER:PTHR11941	PANTHER:PTHR11941:SF129	PFAM:PF00378	ScanProsite:PS00166
SEG:seg	SUPFAM:SSF52096	UniParc:UPI000296948C	UniProt:M0SZL2	MapMan:4.2.7.5.3	:

Description

Methylglutaconyl-CoA hydratase, mitochondrial [Source:GMGC_GENE;Acc:GSMUA_Achr5G18330_001]

Coordinates

chr5:+:19781550..19786106

Molecular Weight (calculated)

33330.4 Da

IEP (calculated)

8.489

GRAVY (calculated)

-0.062

Length

312 amino acids

Sequence
(BLAST)

001: MPGFPALVGR SIFRSSSHAL RSTHLTTGVA AAPPLLHRFG SRRALIIQTL SGPVRIERLS DSDSGIIELK LDRPEAKNAI GKEMLRGLQN AIETIGNDSS
101: ANVVVVSSSV PKVFCAGADL KERKLMSASE VQQFVNSLRS TFSSLEELSV PTVAVIEGAA LGGGLEMALS CDLRVCGEQS TFSLPETGLA IIPGAGGTQR
201: LPRIVGRSAA KELIFTGRRI SGKEAVSMGL VNYCVPAGEA HHKALEIARD INQKGPLAIR MAKQAINKGL EVDMPSALDA EEECYEQLLD TQDRLEGLAA
301: FAEKRKPRYL GK

Best Arabidopsis Sequence Match ( AT4G16800.1 )
(BLAST)

001: MSFVKYLRRD NLLQLAGKPS LSRNYILQTC RTLIIETSPP EFVKLNRLSG SDSGIIEVNL DRPVTKNAIN KEMLKSLQNA FESIHQDNSA RVVMIRSLVP
101: GVFCAGADLK ERRTMSPSEV HTYVNSLRYM FSFIEALSIP TIAAIEGAAL GGGLEMALAC DLRICGENAV FGLPETGLAI IPGAGGTQRL SRLVGRSVSK
201: ELIFTGRKID AIEAANKGLV NICVTAGEAH EKAIEMAQQI NEKGPLAIKM AKKAIDEGIE TNMASGLEVE EMCYQKLLNT QDRLEGLAAF AEKRKPLYTG
301: N

Arabidopsis Description

Probable enoyl-CoA hydratase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JML5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.