Factsheet for GSMUA_Achr11P05010_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plasma membrane

Predictor Summary:

cytosol 1
peroxisome 4
plasma membrane 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P10700_001	Banana	mitochondrion, peroxisome, plastid	90.11	89.77
Os03t0310400-01	Rice	extracellular, nucleus, plasma membrane	75.67	74.25
EER94969	Sorghum	peroxisome, plastid	75.29	73.88
VIT_05s0077g00860.t01	Wine grape	peroxisome, plastid	73.76	72.93
Zm00001d028909_P001	Maize	extracellular, mitochondrion	74.14	72.49
TraesCS4D01G183100.1	Wheat	peroxisome	71.86	70.52
TraesCS4A01G122800.1	Wheat	peroxisome	71.86	70.52
HORVU4Hr1G053180.1	Barley	peroxisome	71.86	70.52
TraesCS4B01G182600.1	Wheat	peroxisome	71.48	70.15
KRH50717	Soybean	mitochondrion, peroxisome	30.8	69.83
CDX90535	Canola	peroxisome	67.3	68.34
CDY09705	Canola	cytosol, mitochondrion, peroxisome	67.3	68.34
KRH02364	Soybean	peroxisome	68.82	68.3
Bra012731.1-P	Field mustard	cytosol, peroxisome, plasma membrane	66.92	67.95
AT4G16210.1	Thale cress	peroxisome	68.44	67.92
PGSC0003DMT400003039	Potato	cytosol	67.68	67.17
Solyc01g059830.2.1	Tomato	nucleus, plastid	66.54	66.04
KRH50718	Soybean	plastid	39.54	62.65
GSMUA_Achr5P18330_001	Banana	mitochondrion	27.38	23.08
GSMUA_Achr4P07800_001	Banana	mitochondrion	28.52	22.39
GSMUA_Achr7P22470_001	Banana	peroxisome	22.43	20.42
GSMUA_Achr4P07830_001	Banana	cytosol, mitochondrion, peroxisome	12.93	17.09
GSMUA_Achr3P24070_001	Banana	cytosol, peroxisome, plastid	25.1	9.22
GSMUA_Achr2P01720_001	Banana	peroxisome	23.95	8.75
GSMUA_Achr7P14420_001	Banana	peroxisome	23.95	8.69
GSMUA_Achr8P19760_001	Banana	peroxisome	23.19	8.34
GSMUA_Achr9P20010_001	Banana	peroxisome	3.8	3.36

Protein Annotations

EnsemblPlants:GSMUA_Achr11P05010_001	EnsemblPlants:GSMUA_Achr11T05010_001	EnsemblPlantsGene:GSMUA_Achr11G05010_001	Gene3D:3.90.226.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hydra/iso	PANTHER:PTHR43802	PFAM:PF00378
SUPFAM:SSF52096	UniParc:UPI0002948CE8	UniProt:M0RPI1	MapMan:35.1	:	:

Description

Putative Probable enoyl-CoA hydratase echA8 [Source:GMGC_GENE;Acc:GSMUA_Achr11G05010_001]

Coordinates

chr11:-:3735358..3739048

Molecular Weight (calculated)

28398.8 Da

IEP (calculated)

9.182

GRAVY (calculated)

0.125

Length

263 amino acids

Sequence
(BLAST)

001: MEAAPPAELI VVERDPTGVA VITINRPSSL NSLTRPMMVL LAAAISRLDA DPAVGALVIT GRGRAFCSGV DLTAAEEVFK GDVKDVDANP VAQMERCRKP
101: IIGAVNGFAV TAGFEIALAC DILVAGKDAK FIDTHTRFGI FPSWGLSQKL PRIIGISRAR EVSLSGMAIT AEMAEKWGLV NHVVDNGEVL KKAKEVALAI
201: LRNNRDMVLM YKSVINDGFK LDLGHALALE KERAHSYYNG MTKEQFAAMQ KFILSRSSKS SKL

Best Arabidopsis Sequence Match ( AT4G16210.1 )
(BLAST)

001: MDQTVSENLI QVKKESGGIA VITINRPKSL NSLTRAMMVD LAKAFKDMDS DESVQVVIFT GSGRSFCSGV DLTAAESVFK GDVKDPETDP VVQMERLRKP
101: IIGAINGFAI TAGFELALAC DILVASRGAK FMDTHARFGI FPSWGLSQKL SRIIGANKAR EVSLTSMPLT ADVAGKLGFV NHVVEEGEAL KKAREIAEAI
201: IKNEQGMVLR IKSVINDGLK LDLGHALTLE KERAHAYYSG MTKEQFRKMQ EFIAGRGSKK PSSKL

Arabidopsis Description

ECHIAProbable enoyl-CoA hydratase 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q6NL24]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.