Factsheet for GSMUA_Achr4P07800_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 2
cytosol 2
mitochondrion 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr4P07830_001	Banana	cytosol, mitochondrion, peroxisome	48.96	82.41
VIT_01s0127g00420.t01	Wine grape	mitochondrion	80.0	79.76
PGSC0003DMT400035160	Potato	mitochondrion	80.3	79.12
Solyc05g005180.2.1	Tomato	nucleus	78.81	78.34
CDY47214	Canola	cytosol, mitochondrion, peroxisome	74.63	75.76
Bra027150.1-P	Field mustard	cytosol, mitochondrion, peroxisome	75.52	74.85
CDY53045	Canola	cytosol, mitochondrion, peroxisome	74.63	73.96
AT1G60550.1	Thale cress	cytosol	74.33	73.89
KRH45650	Soybean	nucleus	73.43	72.57
KRG99357	Soybean	nucleus	71.34	70.92
GSMUA_Achr8P10700_001	Banana	mitochondrion, peroxisome, plastid	22.69	28.79
GSMUA_Achr11P...	Banana	mitochondrion, peroxisome, plasma membrane	22.39	28.52
GSMUA_Achr5P18330_001	Banana	mitochondrion	21.79	23.4
GSMUA_Achr7P22470_001	Banana	peroxisome	18.81	21.8
GSMUA_Achr3P24070_001	Banana	cytosol, peroxisome, plastid	20.3	9.5
GSMUA_Achr7P14420_001	Banana	peroxisome	20.3	9.38
GSMUA_Achr2P01720_001	Banana	peroxisome	20.0	9.31
GSMUA_Achr8P19760_001	Banana	peroxisome	20.3	9.3
GSMUA_Achr9P20010_001	Banana	peroxisome	2.99	3.36

Protein Annotations

KEGG:00130+4.1.3.36	Gene3D:1.10.12.10	Gene3D:3.90.226.10	MapMan:7.13.4	InterPro:ClpP/crotonase-like_dom_sf	InterPro:DHNA-CoA_synthase_MenB
InterPro:Enoyl-CoA_hyd/isom_CS	InterPro:Enoyl-CoA_hydra/iso	InterPro:Enoyl-CoA_hydra_C	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0008150	GO:GO:0008152
GO:GO:0008935	GO:GO:0009058	GO:GO:0009234	GO:GO:0009987	EnsemblPlantsGene:GSMUA_Achr4G07800_001	EnsemblPlants:GSMUA_Achr4P07800_001
EnsemblPlants:GSMUA_Achr4T07800_001	InterPro:IPR014748	UniProt:M0SLZ7	HAMAP:MF_01934	PFAM:PF00378	ScanProsite:PS00166
PANTHER:PTHR43113	PANTHER:PTHR43113:SF1	SUPFAM:SSF52096	TIGRFAMs:TIGR01929	UniParc:UPI0002960516	SEG:seg

Description

Naphthoate synthase [Source:GMGC_GENE;Acc:GSMUA_Achr4G07800_001]

Coordinates

chr4:-:5814515..5819589

Molecular Weight (calculated)

36883.3 Da

IEP (calculated)

9.297

GRAVY (calculated)

-0.263

Length

335 amino acids

Sequence
(BLAST)

001: MADVSGKDLR TAGRRIARIA HHLLPLATPP PRPLPIQRSV ASANDSYRRV HGEVSTREAT WIPACDESGK EYTDIIYEKA VGEGIAKITI NRPDRRNAFR
101: PNTIKELIRA FNDARDDSTV GVIILTGKGN KAFCSGGDQA LRSSDGYADF ESFGRLNVLD LQVQIRRLPK PVIAMVAGYA VGGGHILHMV CDLTIAADNA
201: VFGQTGPKVG SFDAGYGSSI MSRLIGPKKA REMWFLCRFY DAYEAEKMGL VNIVVPLERL ELETLKWCRE ILRNSPTAIR VLKSALNAVD DGHAGLQELG
301: GNATLVFYGT EEASEGKIAY LNHRRPDFSK FPRRP

Best Arabidopsis Sequence Match ( AT1G60550.1 )
(BLAST)

001: MADSNELGSA SRRLSVVTNH LIPIGFSPAR ADSVELCSAS SMDDRFHKVH GEVPTHEVVW KKTDFFGEGD NKEFVDIIYE KALDEGIAKI TINRPERRNA
101: FRPQTVKELM RAFNDARDDS SVGVIILTGK GTKAFCSGGD QALRTQDGYA DPNDVGRLNV LDLQVQIRRL PKPVIAMVAG YAVGGGHILH MVCDLTIAAD
201: NAIFGQTGPK VGSFDAGYGS SIMSRLVGPK KAREMWFMTR FYTASEAEKM GLINTVVPLE DLEKETVKWC REILRNSPTA IRVLKAALNA VDDGHAGLQG
301: LGGDATLLFY GTEEATEGRT AYMHRRPPDF SKFHRRP

Arabidopsis Description

MENB1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8GYN9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.