Factsheet for Bra027150.1-P

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, cytosol

Predictor Summary:

cytosol 3
peroxisome 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY53045	Canola	cytosol, mitochondrion, peroxisome	98.52	98.52
CDY47214	Canola	cytosol, mitochondrion, peroxisome	96.15	98.48
AT1G60550.1	Thale cress	cytosol	89.64	89.91
PGSC0003DMT400035160	Potato	mitochondrion	79.88	79.41
Solyc05g005180.2.1	Tomato	nucleus	78.99	79.23
VIT_01s0127g00420.t01	Wine grape	mitochondrion	77.22	77.68
GSMUA_Achr4P07800_001	Banana	mitochondrion	74.85	75.52
Zm00001d043970_P001	Maize	mitochondrion	73.96	74.4
Os01t0662700-01	Rice	mitochondrion	72.49	74.02
KRH45650	Soybean	nucleus	73.96	73.75
TraesCS3D01G241000.1	Wheat	mitochondrion	72.19	73.49
TraesCS3A01G240600.1	Wheat	mitochondrion	72.19	73.49
TraesCS3B01G268700.1	Wheat	mitochondrion	71.89	73.19
EES06293	Sorghum	plastid	73.08	73.08
KRG99357	Soybean	nucleus	72.49	72.7
HORVU3Hr1G059840.4	Barley	plastid	72.49	68.06
Bra012731.1-P	Field mustard	cytosol, peroxisome, plasma membrane	21.6	28.19
Bra027479.1-P	Field mustard	peroxisome	20.71	25.36
Bra021079.1-P	Field mustard	nucleus	23.37	10.17
Bra011076.1-P	Field mustard	peroxisome	21.6	10.11
Bra010347.1-P	Field mustard	peroxisome	21.01	9.67
Bra001221.1-P	Field mustard	peroxisome	19.23	8.97
Bra040296.1-P	Field mustard	peroxisome	18.93	8.83
Bra029608.1-P	Field mustard	peroxisome	18.64	8.69
Bra024170.1-P	Field mustard	peroxisome	18.64	8.55
Bra027263.1-P	Field mustard	peroxisome	3.55	4.08

Protein Annotations

KEGG:00130+4.1.3.36	Gene3D:1.10.12.10	Gene3D:3.90.226.10	MapMan:7.13.4	EnsemblPlantsGene:Bra027150	EnsemblPlants:Bra027150.1
EnsemblPlants:Bra027150.1-P	InterPro:ClpP/crotonase-like_dom_sf	InterPro:DHNA-CoA_synthase_MenB	InterPro:Enoyl-CoA_hyd/isom_CS	InterPro:Enoyl-CoA_hydra/iso	InterPro:Enoyl-CoA_hydra_C
GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	GO:GO:0008150	GO:GO:0008152	GO:GO:0008935	GO:GO:0009058	GO:GO:0009234
GO:GO:0009987	InterPro:IPR014748	UniProt:M4EED8	HAMAP:MF_01934	PFAM:PF00378	ScanProsite:PS00166
PANTHER:PTHR43113	PANTHER:PTHR43113:SF1	SUPFAM:SSF52096	TIGRFAMs:TIGR01929	UniParc:UPI00025426D8	:

Description

AT1G60550 (E=3e-174) ECHID, DHNS | ECHID (ENOYL-COA HYDRATASE/ISOMERASE D); catalytic/ naphthoate synthase

Coordinates

chrA09:+:8808443..8810409

Molecular Weight (calculated)

37144.5 Da

IEP (calculated)

7.661

GRAVY (calculated)

-0.295

Length

338 amino acids

Sequence
(BLAST)

001: MADSKELGTA SRRISVFTNH LIPLETIPTR VHSVELSTAS SMNDNYHKVH GEVPTHQVVW RKADLVGDDG ETKEFVDIIY EKAVGEDIAK ITINRPERRN
101: AFRPQTVKEL MRAFNDARDD SSVGVIILTG KGTKAFCSGG DQALRTPDGY ADPNDVGRLN VLDLQVQIRR LPKPVIAMVA GYAVGGGHIL HMVCDLTIAA
201: DNAIFGQTGP KVGSFDAGYG SSIMSRLVGP KKAREMWFMT RFYTASEADK MGLINTVVPL EDLEKETVKW CREILRNSPT AIRVLKAALN AVDDGHAGLQ
301: GLGGDATLLF YGTEEGIEGR TAYMERRPPN FSKFPRRP

Best Arabidopsis Sequence Match ( AT1G60550.1 )
(BLAST)

001: MADSNELGSA SRRLSVVTNH LIPIGFSPAR ADSVELCSAS SMDDRFHKVH GEVPTHEVVW KKTDFFGEGD NKEFVDIIYE KALDEGIAKI TINRPERRNA
101: FRPQTVKELM RAFNDARDDS SVGVIILTGK GTKAFCSGGD QALRTQDGYA DPNDVGRLNV LDLQVQIRRL PKPVIAMVAG YAVGGGHILH MVCDLTIAAD
201: NAIFGQTGPK VGSFDAGYGS SIMSRLVGPK KAREMWFMTR FYTASEAEKM GLINTVVPLE DLEKETVKWC REILRNSPTA IRVLKAALNA VDDGHAGLQG
301: LGGDATLLFY GTEEATEGRT AYMHRRPPDF SKFHRRP

Arabidopsis Description

MENB1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8GYN9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.