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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 3
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • peroxisome 3
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, mitochondrion, peroxisome, secretory
BaCelLo:cytosol
EpiLoc:cytosol
iPSORT:secretory
MultiLoc:peroxisome
PProwler:mitochondrion
PTS1:peroxisome
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDX97647 Canola peroxisome 97.96 91.43
AT3G15290.1 Thale cress cytosol, mitochondrion, peroxisome 90.82 90.82
VIT_19s0014g02370.t01 Wine grape peroxisome 76.53 76.01
Solyc07g063010.2.1 Tomato nucleus 75.51 75.0
PGSC0003DMT400032309 Potato peroxisome 75.17 74.66
KRH55235 Soybean peroxisome 60.88 71.89
GSMUA_Achr9P20010_001 Banana peroxisome 70.75 69.8
EES01597 Sorghum peroxisome, plasma membrane 69.73 68.56
TraesCS3D01G321200.1 Wheat peroxisome 70.41 68.09
KRH55427 Soybean nucleus 73.81 68.03
Os01t0796400-01 Rice nucleus 69.73 67.88
Zm00001d012590_P001 Maize extracellular 68.37 67.22
TraesCS3A01G327700.1 Wheat peroxisome 69.05 66.78
TraesCS3B01G357200.1 Wheat peroxisome 70.41 62.35
Bra011076.1-P Field mustard peroxisome 28.23 11.5
Bra024170.1-P Field mustard peroxisome 27.55 10.99
Bra010347.1-P Field mustard peroxisome 26.87 10.76
Bra029608.1-P Field mustard peroxisome 25.85 10.48
Bra040296.1-P Field mustard peroxisome 25.17 10.21
Bra001221.1-P Field mustard peroxisome 25.17 10.21
HORVU5Hr1G076170.6 Barley plastid 4.42 4.38
Bra012731.1-P Field mustard cytosol, peroxisome, plasma membrane 3.74 4.25
Bra027150.1-P Field mustard cytosol, mitochondrion, peroxisome 4.08 3.55
HORVU6Hr1G021980.6 Barley cytosol 3.06 3.2
Bra027479.1-P Field mustard peroxisome 2.72 2.9
Bra021079.1-P Field mustard nucleus 5.78 2.19
Protein Annotations
KEGG:00062+4.2.1.17+1.1.1.35KEGG:00071+4.2.1.17+1.1.1.35KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00120+1.1.1.35KEGG:00280+4.2.1.17+1.1.1.35KEGG:00281+4.2.1.17+1.1.1.35
KEGG:00310+4.2.1.17+1.1.1.35KEGG:00360+4.2.1.17KEGG:00362+4.2.1.17+1.1.1.35KEGG:00380+4.2.1.17+1.1.1.35KEGG:00410+4.2.1.17KEGG:00592+4.2.1.17
KEGG:00623+1.1.1.35KEGG:00627+4.2.1.17KEGG:00640+4.2.1.17KEGG:00650+4.2.1.17+1.1.1.35KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00720+4.2.1.17+1.1.1.35
KEGG:00903+4.2.1.17KEGG:00930+4.2.1.17+1.1.1.35Gene3D:1.10.1040.50InterPro:3-OHacyl-CoA_DHInterPro:3-OHacyl-CoA_DH_CSInterPro:3-OHacyl-CoA_DH_NAD-bd
Gene3D:3.40.50.720MapMan:35.1InterPro:3HC_DH_CInterPro:6-PGluconate_DH-like_C_sfEnsemblPlantsGene:Bra027263EnsemblPlants:Bra027263.1
EnsemblPlants:Bra027263.1-PGO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003857GO:GO:0005488
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005777GO:GO:0006629
GO:GO:0006631GO:GO:0008150GO:GO:0008152GO:GO:0009987GO:GO:0016491GO:GO:0055114
GO:GO:0070403UniProt:M4EEQ1InterPro:NAD(P)-bd_dom_sfPFAM:PF00725PFAM:PF02737PIRSF:PIRSF000105
ScanProsite:PS00067PANTHER:PTHR43145PANTHER:PTHR43145:SF4SUPFAM:SSF48179SUPFAM:SSF51735UniParc:UPI0002547B11
Description
AT3G15290 (E=5e-150) | 3-hydroxybutyryl-CoA dehydrogenase, putative
Coordinates
chrA05:-:20006432..20007670
Molecular Weight (calculated)
31727.7 Da
IEP (calculated)
8.603
GRAVY (calculated)
0.009
Length
294 amino acids
Sequence
(BLAST)
001: MAEIKCVGVV GAGQMGSGIA QLAATNGLDV WIMDADRDAL SRATAAISSS VNRFVSKGLI SKEVGDDAMR RLRLTSNLQD LRSADIIIEA ILESEDIKKK
101: LFKELDGIAK SSAILASNTS SISITRLASA TQRPTQVIGM HFMNPPPIMK LVEIIHGADT SQETFIATKT LAERFGKTTV CSQDYAGFIV NRILMPMINE
201: AFHTLYTGVA TKEDIDSGMK HGTNQPMGPL ELADLIGLDV CLSIMKVLHQ GLGDSKYAPC PLLVQYVDAG RLGRKRGVGV YDYRKKAATP SPRL
Best Arabidopsis Sequence Match ( AT3G15290.1 )
(BLAST)
001: MAEMKSVGVV GAGQMGSGIA QLAATSGLDV WLMDADRDAL SRATAAISSS VKRFVSKGLI SKEVGDDAMH RLRLTSNLED LCSADIIVEA IVESEDIKKK
101: LFKDLDGIAK SSAILASNTS SISITRLASA TRRPSQVIGM HFMNPPPIMK LVEIIRGADT SEETFLATKV LAERFGKTTV CSQDYAGFVV NRILMPMINE
201: AFHTLYTGVA TKEDIDSGMK HGTNHPMGPL ELADLIGLDV CLSVMKVLHE GLGDSKYAPC PLLVQYVDAG RLGRKRGVGV YDYREATQKL SPRL
Arabidopsis Description
3-hydroxyacyl-CoA dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LDF5]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.