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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • peroxisome 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra027263.1-P Field mustard peroxisome 91.43 97.96
CDX98542 Canola peroxisome 88.57 96.21
AT3G15290.1 Thale cress cytosol, mitochondrion, peroxisome 84.44 90.48
VIT_19s0014g02370.t01 Wine grape peroxisome 72.06 76.69
Solyc07g063010.2.1 Tomato nucleus 70.48 75.0
PGSC0003DMT400032309 Potato peroxisome 69.84 74.32
KRH55235 Soybean peroxisome 57.78 73.09
GSMUA_Achr9P20010_001 Banana peroxisome 66.35 70.13
EES01597 Sorghum peroxisome, plasma membrane 66.03 69.57
TraesCS3D01G321200.1 Wheat peroxisome 66.67 69.08
KRH55427 Soybean nucleus 69.52 68.65
Os01t0796400-01 Rice nucleus 65.71 68.54
Zm00001d012590_P001 Maize extracellular 64.76 68.23
TraesCS3A01G327700.1 Wheat peroxisome 65.08 67.43
TraesCS3B01G357200.1 Wheat peroxisome 66.35 62.95
CDY69211 Canola mitochondrion, peroxisome 26.67 13.77
CDY35240 Canola peroxisome 26.67 11.63
CDY06852 Canola peroxisome 26.67 11.63
CDY66477 Canola peroxisome 26.03 11.37
CDX97462 Canola peroxisome 26.03 11.37
CDX92908 Canola peroxisome 26.67 10.67
CDX74076 Canola peroxisome 24.44 10.61
CDY08028 Canola peroxisome 24.44 10.61
CDY24662 Canola peroxisome 24.13 10.47
CDY05296 Canola peroxisome 23.81 10.34
CDY34924 Canola peroxisome 23.49 10.18
CDY67750 Canola mitochondrion 4.76 4.98
HORVU5Hr1G076170.6 Barley plastid 4.44 4.71
CDY09705 Canola cytosol, mitochondrion, peroxisome 3.49 4.25
CDX90535 Canola peroxisome 3.49 4.25
CDY53045 Canola cytosol, mitochondrion, peroxisome 4.44 4.14
CDY43605 Canola peroxisome 3.49 3.99
CDY47214 Canola cytosol, mitochondrion, peroxisome 4.13 3.94
CDY32958 Canola peroxisome 3.17 3.62
HORVU6Hr1G021980.6 Barley cytosol 3.17 3.56
Protein Annotations
KEGG:00062+4.2.1.17+1.1.1.35KEGG:00071+4.2.1.17+1.1.1.35KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00120+1.1.1.35KEGG:00280+4.2.1.17+1.1.1.35KEGG:00281+4.2.1.17+1.1.1.35
KEGG:00310+4.2.1.17+1.1.1.35KEGG:00360+4.2.1.17KEGG:00362+4.2.1.17+1.1.1.35KEGG:00380+4.2.1.17+1.1.1.35KEGG:00410+4.2.1.17KEGG:00592+4.2.1.17
KEGG:00623+1.1.1.35KEGG:00627+4.2.1.17KEGG:00640+4.2.1.17KEGG:00650+4.2.1.17+1.1.1.35KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00720+4.2.1.17+1.1.1.35
KEGG:00903+4.2.1.17KEGG:00930+4.2.1.17+1.1.1.35Gene3D:1.10.1040.50InterPro:3-OHacyl-CoA_DHInterPro:3-OHacyl-CoA_DH_CSInterPro:3-OHacyl-CoA_DH_NAD-bd
Gene3D:3.40.50.720MapMan:35.1InterPro:3HC_DH_CInterPro:6-PGluconate_DH-like_C_sfGO:A0A078E9E6EnsemblPlants:CDX97647
ProteinID:CDX97647ProteinID:CDX97647.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003857
GO:GO:0005488GO:GO:0006629GO:GO:0006631GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016491GO:GO:0055114GO:GO:0070403EnsemblPlantsGene:GSBRNA2T00104879001InterPro:NAD(P)-bd_dom_sfPFAM:PF00725
PFAM:PF02737PIRSF:PIRSF000105ScanProsite:PS00067PANTHER:PTHR43145PANTHER:PTHR43145:SF4MetaCyc:PWY-1361
MetaCyc:PWY-5109MetaCyc:PWY-5136MetaCyc:PWY-5138MetaCyc:PWY-5177MetaCyc:PWY-5789MetaCyc:PWY-6435
MetaCyc:PWY-6583MetaCyc:PWY-6863MetaCyc:PWY-6883MetaCyc:PWY-6944MetaCyc:PWY-6945MetaCyc:PWY-6946
MetaCyc:PWY-7007MetaCyc:PWY-7046MetaCyc:PWY-7094MetaCyc:PWY-7216MetaCyc:PWY-735MetaCyc:PWY-7401
MetaCyc:PWY-7606MetaCyc:PWY-7726SUPFAM:SSF48179SUPFAM:SSF51735UniPathway:UPA00659UniParc:UPI0004EEBDFE
Description
BnaA05g24320D
Coordinates
chrLK031900:+:778254..779863
Molecular Weight (calculated)
34061.6 Da
IEP (calculated)
8.839
GRAVY (calculated)
0.009
Length
315 amino acids
Sequence
(BLAST)
001: MAEIKCVGVV GAGQMGSGIA QLAATNGLDV WIMDADRDAL SRATAAISSS VNRFVSKGLL SKARSLSMLC SCYFPIKFCS DKSEAGDDAM RRLRLTSNLQ
101: DLRSADIIIE AIMESEDIKK KLFKELDGIA KSSAILASNT SSISITRLAS ATQRPTQVIG MHFMNPPPIM KLVEIIRGAD TSQETFIATK ALAERFGKTT
201: VCSQDYAGFI VNRILMPMIN EAFHTLYTGV ATKEDIDSGM KHGTNQPMGP LELADLIGLD VCLSIMKVLH QGLGDSKYAP CPLLVQYVDA GRLGRKRGVG
301: VYDYRKKAGT PSPRL
Best Arabidopsis Sequence Match ( AT3G15290.1 )
(BLAST)
001: MAEMKSVGVV GAGQMGSGIA QLAATSGLDV WLMDADRDAL SRATAAISSS VKRFVSKGLI SKEVGDDAMH RLRLTSNLED LCSADIIVEA IVESEDIKKK
101: LFKDLDGIAK SSAILASNTS SISITRLASA TRRPSQVIGM HFMNPPPIMK LVEIIRGADT SEETFLATKV LAERFGKTTV CSQDYAGFVV NRILMPMINE
201: AFHTLYTGVA TKEDIDSGMK HGTNHPMGPL ELADLIGLDV CLSVMKVLHE GLGDSKYAPC PLLVQYVDAG RLGRKRGVGV YDYREATQKL SPRL
Arabidopsis Description
3-hydroxyacyl-CoA dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LDF5]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.