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Maize
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Maize
Subcellular Localization
min:
: max

 
Winner_takes_all: extracellular

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • peroxisome 2
  • mitochondrion 1
  • plastid 1
  • cytosol 1
Predictors GFP MS/MS Papers
Winner Takes All:extracellular
Any Predictor:mitochondrion, peroxisome, plastid, secretory
iPSORT:secretory
MultiLoc:peroxisome
PProwler:mitochondrion
TargetP:plastid
WoLF PSORT:cytosol
YLoc:peroxisome
 extracellular: 20408568
msms PMID: 20408568 doi
W Ma, N Muthreich, C Liao, M Franz-Wachtel, W Schütz, F Zhang, F Hochholdinger, C Li
Department of Plant Nutrition, China Agricultural University, Beijing, PR China.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
EES01597 Sorghum peroxisome, plasma membrane 93.65 93.65
Os01t0796400-01 Rice nucleus 86.96 86.09
TraesCS3D01G321200.1 Wheat peroxisome 85.62 84.21
TraesCS3A01G327700.1 Wheat peroxisome 83.28 81.91
TraesCS3B01G357200.1 Wheat peroxisome 85.95 77.41
GSMUA_Achr9P20010_001 Banana peroxisome 70.57 70.81
CDX98542 Canola peroxisome 67.56 69.66
Solyc07g063010.2.1 Tomato nucleus 68.23 68.92
PGSC0003DMT400032309 Potato peroxisome 67.89 68.58
Bra027263.1-P Field mustard peroxisome 67.22 68.37
AT3G15290.1 Thale cress cytosol, mitochondrion, peroxisome 67.22 68.37
KRH55235 Soybean peroxisome 56.52 67.87
VIT_19s0014g02370.t01 Wine grape peroxisome 66.22 66.89
CDX97647 Canola peroxisome 68.23 64.76
KRH55427 Soybean nucleus 68.23 63.95
Zm00001d009182_P009 Maize extracellular, mitochondrion, peroxisome, plasma membrane 29.77 12.31
Zm00001d037939_P003 Maize peroxisome 27.76 11.56
Zm00001d053308_P009 Maize peroxisome 28.76 11.18
Zm00001d015992_P001 Maize peroxisome 28.76 7.15
HORVU5Hr1G076170.6 Barley plastid 4.68 4.71
Zm00001d017459_P002 Maize mitochondrion 4.35 4.29
Zm00001d028909_P001 Maize extracellular, mitochondrion 3.68 4.09
Zm00001d017458_P003 Maize mitochondrion 4.01 3.69
HORVU6Hr1G021980.6 Barley cytosol 3.34 3.56
Zm00001d043970_P001 Maize mitochondrion 3.68 3.27
Zm00001d011971_P001 Maize mitochondrion, peroxisome 2.68 2.78
Protein Annotations
KEGG:00062+4.2.1.17+1.1.1.35KEGG:00071+4.2.1.17+1.1.1.35KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00120+1.1.1.35KEGG:00280+4.2.1.17+1.1.1.35KEGG:00281+4.2.1.17+1.1.1.35
KEGG:00310+4.2.1.17+1.1.1.35KEGG:00360+4.2.1.17KEGG:00362+4.2.1.17+1.1.1.35KEGG:00380+4.2.1.17+1.1.1.35KEGG:00410+4.2.1.17KEGG:00592+4.2.1.17
KEGG:00623+1.1.1.35KEGG:00627+4.2.1.17KEGG:00640+4.2.1.17KEGG:00650+4.2.1.17+1.1.1.35KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00720+4.2.1.17+1.1.1.35
KEGG:00903+4.2.1.17KEGG:00930+4.2.1.17+1.1.1.35Gene3D:1.10.1040.10EntrezGene:100191282InterPro:3-OHacyl-CoA_DHInterPro:3-OHacyl-CoA_DH_CS
InterPro:3-OHacyl-CoA_DH_NAD-bdGene3D:3.40.50.720MapMan:35.1InterPro:3HC_DH_CInterPro:6-PGluconate_DH-like_C_sfInterPro:6PGD_dom2
ProteinID:AQK99914.1UniProt:B4F890EMBL:BT033328EMBL:BT040745GO:GO:0000166GO:GO:0003674
GO:GO:0003824GO:GO:0003857GO:GO:0005488GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005777GO:GO:0006629GO:GO:0006631GO:GO:0008150GO:GO:0008152
GO:GO:0009987GO:GO:0016491GO:GO:0055114GO:GO:0070403InterPro:IPR013328InterPro:NAD(P)-bd_dom_sf
PFAM:PF00725PFAM:PF02737PIRSF:PIRSF000105ScanProsite:PS00067PANTHER:PTHR43145PANTHER:PTHR43145:SF4
SUPFAM:SSF48179SUPFAM:SSF51735UniParc:UPI00017B6010EnsemblPlantsGene:Zm00001d012590EnsemblPlants:Zm00001d012590_P001EnsemblPlants:Zm00001d012590_T001
SEG:seg:::::
Description
3-hydroxybutyryl-CoA dehydrogenase [Source:UniProtKB/TrEMBL;Acc:B4F890]
Coordinates
chr8:-:176950180..176952032
Molecular Weight (calculated)
31672.7 Da
IEP (calculated)
9.009
GRAVY (calculated)
0.224
Length
299 amino acids
Sequence
(BLAST)
001: MATASEIAAV GVIGAGQMGS GIAQLAAAGG CAVLLLDADP TALSRAVISI SASLRRLAAK GQLSQAACED SIKRIRCVSA VQDLRDADLV IEAVVENEAV
101: KKKLFVELDK VTKPSAILAS NTSSISITRL ASATKRPSQV IGMHFFNPPP VMKLIEIIRG ADTSDEVFAA VRSFSERLGK SVICSQDYPG FIVNRILMPM
201: INEAFWALYT GVATKEDIDA GMKLGTNHPM GPLQLADFIG LDVCLSVLRV LHSGLGDSKY SPCPLLVQYV DAGRLGKKRG VGVYSYGHRP SSVRPKSSL
Best Arabidopsis Sequence Match ( AT3G15290.1 )
(BLAST)
001: MAEMKSVGVV GAGQMGSGIA QLAATSGLDV WLMDADRDAL SRATAAISSS VKRFVSKGLI SKEVGDDAMH RLRLTSNLED LCSADIIVEA IVESEDIKKK
101: LFKDLDGIAK SSAILASNTS SISITRLASA TRRPSQVIGM HFMNPPPIMK LVEIIRGADT SEETFLATKV LAERFGKTTV CSQDYAGFVV NRILMPMINE
201: AFHTLYTGVA TKEDIDSGMK HGTNHPMGPL ELADLIGLDV CLSVMKVLHE GLGDSKYAPC PLLVQYVDAG RLGRKRGVGV YDYREATQKL SPRL
Arabidopsis Description
3-hydroxyacyl-CoA dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LDF5]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.