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Canola
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Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 2
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • peroxisome 2
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, peroxisome
BaCelLo:cytosol
iPSORT:secretory
MultiLoc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
AT3G15290.1 Thale cress cytosol, mitochondrion, peroxisome 91.38 90.14
CDX97647 Canola peroxisome 96.21 88.57
VIT_19s0014g02370.t01 Wine grape peroxisome 77.59 76.01
Solyc07g063010.2.1 Tomato nucleus 77.24 75.68
PGSC0003DMT400032309 Potato peroxisome 76.9 75.34
KRH55235 Soybean peroxisome 62.41 72.69
TraesCS3D01G321200.1 Wheat peroxisome 72.41 69.08
EES01597 Sorghum peroxisome, plasma membrane 71.03 68.9
GSMUA_Achr9P20010_001 Banana peroxisome 70.69 68.79
KRH55427 Soybean nucleus 75.17 68.34
Os01t0796400-01 Rice nucleus 71.03 68.21
TraesCS3A01G327700.1 Wheat peroxisome 71.03 67.76
Zm00001d012590_P001 Maize extracellular 69.66 67.56
TraesCS3B01G357200.1 Wheat peroxisome 72.41 63.25
CDY69211 Canola mitochondrion, peroxisome 28.97 13.77
CDY06852 Canola peroxisome 28.62 11.5
CDY35240 Canola peroxisome 28.62 11.5
CDY66477 Canola peroxisome 27.93 11.23
CDX97462 Canola peroxisome 27.93 11.23
CDX92908 Canola peroxisome 28.62 10.55
CDY05296 Canola peroxisome 26.21 10.48
CDY24662 Canola peroxisome 26.21 10.47
CDY08028 Canola peroxisome 26.21 10.47
CDX74076 Canola peroxisome 26.21 10.47
CDY34924 Canola peroxisome 25.52 10.18
CDY67750 Canola mitochondrion 5.17 4.98
HORVU5Hr1G076170.6 Barley plastid 4.48 4.38
CDY09705 Canola cytosol, mitochondrion, peroxisome 3.45 3.86
CDX90535 Canola peroxisome 3.45 3.86
CDY53045 Canola cytosol, mitochondrion, peroxisome 4.48 3.85
CDY47214 Canola cytosol, mitochondrion, peroxisome 4.14 3.64
CDY43605 Canola peroxisome 3.45 3.62
CDY32958 Canola peroxisome 3.1 3.26
HORVU6Hr1G021980.6 Barley cytosol 3.1 3.2
Protein Annotations
KEGG:00062+4.2.1.17+1.1.1.35KEGG:00071+4.2.1.17+1.1.1.35KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00120+1.1.1.35KEGG:00280+4.2.1.17+1.1.1.35KEGG:00281+4.2.1.17+1.1.1.35
KEGG:00310+4.2.1.17+1.1.1.35KEGG:00360+4.2.1.17KEGG:00362+4.2.1.17+1.1.1.35KEGG:00380+4.2.1.17+1.1.1.35KEGG:00410+4.2.1.17KEGG:00592+4.2.1.17
KEGG:00623+1.1.1.35KEGG:00627+4.2.1.17KEGG:00640+4.2.1.17KEGG:00650+4.2.1.17+1.1.1.35KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00720+4.2.1.17+1.1.1.35
KEGG:00903+4.2.1.17KEGG:00930+4.2.1.17+1.1.1.35Gene3D:1.10.1040.50InterPro:3-OHacyl-CoA_DHInterPro:3-OHacyl-CoA_DH_CSInterPro:3-OHacyl-CoA_DH_NAD-bd
Gene3D:3.40.50.720MapMan:35.1InterPro:3HC_DH_CInterPro:6-PGluconate_DH-like_C_sfGO:A0A078EC23EnsemblPlants:CDX98542
ProteinID:CDX98542ProteinID:CDX98542.1GO:GO:0000166GO:GO:0003674GO:GO:0003824GO:GO:0003857
GO:GO:0005488GO:GO:0006629GO:GO:0006631GO:GO:0008150GO:GO:0008152GO:GO:0009987
GO:GO:0016491GO:GO:0055114GO:GO:0070403EnsemblPlantsGene:GSBRNA2T00106192001InterPro:NAD(P)-bd_dom_sfPFAM:PF00725
PFAM:PF02737PIRSF:PIRSF000105ScanProsite:PS00067PANTHER:PTHR43145PANTHER:PTHR43145:SF4MetaCyc:PWY-1361
MetaCyc:PWY-5109MetaCyc:PWY-5136MetaCyc:PWY-5138MetaCyc:PWY-5177MetaCyc:PWY-5789MetaCyc:PWY-6435
MetaCyc:PWY-6583MetaCyc:PWY-6863MetaCyc:PWY-6883MetaCyc:PWY-6944MetaCyc:PWY-6945MetaCyc:PWY-6946
MetaCyc:PWY-7007MetaCyc:PWY-7046MetaCyc:PWY-7094MetaCyc:PWY-7216MetaCyc:PWY-735MetaCyc:PWY-7401
MetaCyc:PWY-7606MetaCyc:PWY-7726SUPFAM:SSF48179SUPFAM:SSF51735UniPathway:UPA00659UniParc:UPI0004EE93F4
Description
BnaC05g38330D
Coordinates
chrLK031905:+:880684..882167
Molecular Weight (calculated)
31350.2 Da
IEP (calculated)
8.311
GRAVY (calculated)
-0.023
Length
290 amino acids
Sequence
(BLAST)
001: MAEIKCVGVV GAGQMGSGIA QLAATNGLDV WIMDADRDAL SRATASISSS LNRFVSKGEV GDDAMRRLRL TSNLQDLRSA DIIVEAILES EDIKKKLFKD
101: LDGIAKSSAI LASNTSSISI TRLASATQRP SQVIGMHFMN PPPIMKLVEI IRGADTSEET FIATKALAER FGKTTVCSQD YAGFIVNRIL MPMINEAFHT
201: LYTGVATKED IDSGMKHGTN QPMGPLELAD LIGLDVCLSI MKVLHQGLGD SKYAPCPLLV QYVDAGRLGR KRGMGVYDYR KKPVTPSPRL
Best Arabidopsis Sequence Match ( AT3G15290.1 )
(BLAST)
001: MAEMKSVGVV GAGQMGSGIA QLAATSGLDV WLMDADRDAL SRATAAISSS VKRFVSKGLI SKEVGDDAMH RLRLTSNLED LCSADIIVEA IVESEDIKKK
101: LFKDLDGIAK SSAILASNTS SISITRLASA TRRPSQVIGM HFMNPPPIMK LVEIIRGADT SEETFLATKV LAERFGKTTV CSQDYAGFVV NRILMPMINE
201: AFHTLYTGVA TKEDIDSGMK HGTNHPMGPL ELADLIGLDV CLSVMKVLHE GLGDSKYAPC PLLVQYVDAG RLGRKRGVGV YDYREATQKL SPRL
Arabidopsis Description
3-hydroxyacyl-CoA dehydrogenase family protein [Source:UniProtKB/TrEMBL;Acc:Q9LDF5]
SUBAcon: [mitochondrion,peroxisome,cytosol]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.