Subcellular Localization
min:
: max
Winner_takes_all: plastid
Predictor Summary:
Predictor Summary:
- plastid 3
- extracellular 1
- nucleus 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| HORVU6Hr1G021980.6 | Barley | cytosol | 38.05 | 40.21 |
| HORVU4Hr1G053180.1 | Barley | peroxisome | 11.45 | 12.69 |
| HORVU6Hr1G062260.3 | Barley | plastid | 11.78 | 12.07 |
| HORVU6Hr1G062320.2 | Barley | mitochondrion | 11.78 | 11.59 |
| HORVU1Hr1G027810.27 | Barley | peroxisome | 6.4 | 8.72 |
| HORVU3Hr1G059840.4 | Barley | plastid | 9.76 | 8.06 |
| HORVU1Hr1G058880.12 | Barley | peroxisome | 14.48 | 5.99 |
| HORVU3Hr1G015590.13 | Barley | peroxisome | 14.14 | 5.76 |
| HORVU1Hr1G022450.40 | Barley | peroxisome | 12.46 | 5.49 |
| VIT_19s0014g02370.t01 | Wine grape | peroxisome | 5.39 | 5.41 |
| KRH55235 | Soybean | peroxisome | 4.38 | 5.22 |
| AT3G15290.1 | Thale cress | cytosol, mitochondrion, peroxisome | 5.05 | 5.1 |
| HORVU6Hr1G024100.1 | Barley | peroxisome | 12.46 | 5.1 |
| HORVU3Hr1G013880.1 | Barley | peroxisome | 12.46 | 5.08 |
| HORVU2Hr1G070450.22 | Barley | endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole | 7.07 | 5.0 |
| HORVU3Hr1G083490.1 | Barley | cytosol, mitochondrion, peroxisome | 2.36 | 4.79 |
| KRH55427 | Soybean | nucleus | 5.05 | 4.7 |
| Zm00001d012590_P001 | Maize | extracellular | 4.71 | 4.68 |
| EES01597 | Sorghum | peroxisome, plasma membrane | 4.71 | 4.68 |
| CDX98542 | Canola | peroxisome | 4.38 | 4.48 |
| CDX97647 | Canola | peroxisome | 4.71 | 4.44 |
| Bra027263.1-P | Field mustard | peroxisome | 4.38 | 4.42 |
| PGSC0003DMT400032309 | Potato | peroxisome | 4.38 | 4.39 |
| Solyc07g063010.2.1 | Tomato | nucleus | 4.38 | 4.39 |
| GSMUA_Achr9P20010_001 | Banana | peroxisome | 4.38 | 4.36 |
| HORVU7Hr1G111680.1 | Barley | cytosol, mitochondrion, peroxisome | 1.68 | 4.31 |
| Os01t0796400-01 | Rice | nucleus | 4.38 | 4.3 |
| HORVU2Hr1G047980.1 | Barley | peroxisome | 2.02 | 4.17 |
| TraesCS3D01G321200.1 | Wheat | peroxisome | 4.04 | 3.95 |
| TraesCS3A01G327700.1 | Wheat | peroxisome | 3.7 | 3.62 |
| HORVU4Hr1G045170.1 | Barley | extracellular, mitochondrion, peroxisome | 1.35 | 3.45 |
| TraesCS3B01G357200.1 | Wheat | peroxisome | 3.7 | 3.31 |
Protein Annotations
| EnsemblPlants:HORVU5Hr1G076170.6 | EnsemblPlantsGene:HORVU5Hr1G076170 | Gene3D:3.90.226.10 | InterPro:ClpP/crotonase-like_dom_sf | PANTHER:PTHR23309 | PANTHER:PTHR23309:SF23 |
| SEG:seg | SUPFAM:SSF52096 | TMHMM:TMhelix | UniParc:UPI000B47A967 | UniProt:A0A287RUU0 | MapMan:35.1 |
Description
No Description!
Coordinates
chrchr5H:+:549567610..549571833
Molecular Weight (calculated)
32175.1 Da
IEP (calculated)
12.525
GRAVY (calculated)
-0.422
Length
297 amino acids
Sequence
(BLAST)
(BLAST)
001: PHPRPPMRRR RARRRSGSAR ARARPTRRRS RGRRSAPTGP PPRPMLWRGS ACSRGRRRRR PIICSACSLF FCFPFVPPLA ACSFASWWRL KQGRAWCWIL
101: VAAATATATG AGRSATAAAT GVRRPATIAS IGAGRSATAV ATGFLIKSRK LPTPPSNLGS ARPARNKHRA GSRQTILGSA MAAKGMTEME VGGDDVAVIT
201: ICNPPVNSLS IDVLLSLKES YEEALQRKDV KAIVVTVMGR GAARRRKETC VRSGTSSSTN NKRQRPIRQG AESSLSFAGD RERSQQHVFV PSLLIGT
101: VAAATATATG AGRSATAAAT GVRRPATIAS IGAGRSATAV ATGFLIKSRK LPTPPSNLGS ARPARNKHRA GSRQTILGSA MAAKGMTEME VGGDDVAVIT
201: ICNPPVNSLS IDVLLSLKES YEEALQRKDV KAIVVTVMGR GAARRRKETC VRSGTSSSTN NKRQRPIRQG AESSLSFAGD RERSQQHVFV PSLLIGT
001: MDSRTKGKTV MEVGGDGVAV ITLINPPVNS LSFDVLYNLK SNYEEALSRN DVKAIVITGA KGRFSGGFDI SGFGEMQKGN VKEPKAGYIS IDIITDLLEA
101: ARKPSVAAID GLALGGGLEL AMACHARISA PAAQLGLPEL QLGVIPGFGG TQRLPRLVGL TKALEMILTS KPVKAEEGHS LGLIDAVVPP AELVTTARRW
201: ALDIVGRRKP WVSSVSKTDK LPPLGEAREI LTFAKAQTLK RAPNMKHPLM CLDAIEVGIV SGPRAGLEKE AEVASQVVKL DTTKGLIHVF FSQRGTAKVP
301: GVTDRGLVPR KIKKVAIIGG GLMGSGIATA LILSNYPVIL KEVNEKFLEA GIGRVKANLQ SRVRKGSMSQ EKFEKTMSLL KGSLDYESFR DVDMVIEAVI
401: ENISLKQQIF ADLEKYCPQH CILASNTSTI DLNKIGERTK SQDRIVGAHF FSPAHIMPLL EIVRTNHTSA QVIVDLLDVG KKIKKTPVVV GNCTGFAVNR
501: MFFPYTQAAM FLVECGADPY LIDRAISKFG MPMGPFRLCD LVGFGVAIAT ATQFIENFSE RTYKSMIIPL MQEDKRAGEA TRKGFYLYDD KRKAKPDPEL
601: KKYIEKARSI SGVKLDPKLA NLSEKDIIEM TFFPVVNEAC RVFAEGIAVK AADLDIAGIM GMGFPPYRGG IMFWADSIGS KYIYSRLDEW SKAYGEFFKP
701: CAFLAERGSK GVLLSAPVKQ ASSRL
101: ARKPSVAAID GLALGGGLEL AMACHARISA PAAQLGLPEL QLGVIPGFGG TQRLPRLVGL TKALEMILTS KPVKAEEGHS LGLIDAVVPP AELVTTARRW
201: ALDIVGRRKP WVSSVSKTDK LPPLGEAREI LTFAKAQTLK RAPNMKHPLM CLDAIEVGIV SGPRAGLEKE AEVASQVVKL DTTKGLIHVF FSQRGTAKVP
301: GVTDRGLVPR KIKKVAIIGG GLMGSGIATA LILSNYPVIL KEVNEKFLEA GIGRVKANLQ SRVRKGSMSQ EKFEKTMSLL KGSLDYESFR DVDMVIEAVI
401: ENISLKQQIF ADLEKYCPQH CILASNTSTI DLNKIGERTK SQDRIVGAHF FSPAHIMPLL EIVRTNHTSA QVIVDLLDVG KKIKKTPVVV GNCTGFAVNR
501: MFFPYTQAAM FLVECGADPY LIDRAISKFG MPMGPFRLCD LVGFGVAIAT ATQFIENFSE RTYKSMIIPL MQEDKRAGEA TRKGFYLYDD KRKAKPDPEL
601: KKYIEKARSI SGVKLDPKLA NLSEKDIIEM TFFPVVNEAC RVFAEGIAVK AADLDIAGIM GMGFPPYRGG IMFWADSIGS KYIYSRLDEW SKAYGEFFKP
701: CAFLAERGSK GVLLSAPVKQ ASSRL
Arabidopsis Description
MFP2Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI5]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.