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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • extracellular 1
  • endoplasmic reticulum 1
  • vacuole 1
  • plasma membrane 1
  • golgi 1
  • peroxisome 3
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:peroxisome, secretory
iPSORT:secretory
MultiLoc:peroxisome
WoLF PSORT:peroxisome
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS3D01G077200.1 Wheat peroxisome 95.6 95.34
TraesCS3A01G077000.3 Wheat peroxisome 96.29 94.22
TraesCS3B01G091200.1 Wheat endoplasmic reticulum, vacuole 88.74 93.22
HORVU6Hr1G024100.1 Barley peroxisome 90.8 91.05
EES04919 Sorghum peroxisome 87.5 87.62
Os02t0274100-01 Rice plasma membrane 87.23 87.47
Zm00001d053308_P009 Maize peroxisome 86.68 82.05
GSMUA_Achr7P14420_001 Banana peroxisome 73.35 73.66
GSMUA_Achr8P19760_001 Banana peroxisome 68.82 68.54
KRH48371 Soybean nucleus 67.86 68.23
Solyc07g019670.2.1 Tomato plastid 67.31 67.77
CDY35240 Canola peroxisome 67.17 67.73
VIT_11s0016g03690.t01 Wine grape peroxisome 67.31 67.68
Bra011076.1-P Field mustard peroxisome 67.03 67.59
CDY06852 Canola peroxisome 66.9 67.45
Solyc12g007170.1.1 Tomato plastid 67.03 67.4
PGSC0003DMT400001017 Potato cytosol 66.76 67.13
KRH39301 Soybean endoplasmic reticulum, mitochondrion, nucleus 66.76 67.13
CDY66477 Canola peroxisome 65.8 66.44
CDX97462 Canola peroxisome 65.8 66.44
CDY69211 Canola mitochondrion, peroxisome 55.49 66.23
AT4G29010.1 Thale cress peroxisome 64.97 65.6
Bra010347.1-P Field mustard peroxisome 65.38 64.85
HORVU2Hr1G047980.1 Barley peroxisome 12.64 63.89
Bra024170.1-P Field mustard peroxisome 62.77 62.01
PGSC0003DMT400009982 Potato peroxisome 59.34 60.67
Solyc08g068390.2.1 Tomato peroxisome 58.65 60.14
PGSC0003DMT400014020 Potato peroxisome 59.48 60.06
CDX92908 Canola peroxisome 63.19 58.45
HORVU3Hr1G083490.1 Barley cytosol, mitochondrion, peroxisome 11.54 57.53
HORVU2Hr1G070450.22 Barley endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 32.69 56.67
HORVU3Hr1G015590.13 Barley peroxisome 56.46 56.38
HORVU1Hr1G027810.27 Barley peroxisome 16.07 53.67
HORVU1Hr1G058880.12 Barley peroxisome 52.75 53.48
HORVU1Hr1G022450.40 Barley peroxisome 49.18 53.12
Zm00001d015992_P001 Maize peroxisome 87.09 52.75
HORVU7Hr1G111680.1 Barley cytosol, mitochondrion, peroxisome 8.1 50.86
HORVU4Hr1G045170.1 Barley extracellular, mitochondrion, peroxisome 7.97 50.0
HORVU6Hr1G062320.2 Barley mitochondrion 10.03 24.17
HORVU6Hr1G062260.3 Barley plastid 9.62 24.14
HORVU4Hr1G053180.1 Barley peroxisome 8.52 23.13
HORVU3Hr1G059840.4 Barley plastid 9.62 19.44
HORVU6Hr1G021980.6 Barley cytosol 5.08 13.17
HORVU5Hr1G076170.6 Barley plastid 5.08 12.46
Protein Annotations
KEGG:00062+4.2.1.17+1.1.1.35KEGG:00071+4.2.1.17+1.1.1.35KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8KEGG:00120+1.1.1.35KEGG:00280+4.2.1.17+1.1.1.35
KEGG:00281+4.2.1.17+1.1.1.35KEGG:00310+4.2.1.17+1.1.1.35KEGG:00360+4.2.1.17KEGG:00362+4.2.1.17+1.1.1.35KEGG:00380+4.2.1.17+1.1.1.35KEGG:00410+4.2.1.17
KEGG:00592+4.2.1.17KEGG:00623+1.1.1.35KEGG:00627+4.2.1.17KEGG:00640+4.2.1.17KEGG:00650+4.2.1.17+1.1.1.35KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35
KEGG:00720+4.2.1.17+1.1.1.35KEGG:00903+4.2.1.17KEGG:00930+4.2.1.17+1.1.1.35Gene3D:1.10.1040.50InterPro:3-OHacyl-CoA_DH_CSInterPro:3-OHacyl-CoA_DH_NAD-bd
Gene3D:3.40.50.720Gene3D:3.90.226.10InterPro:3HC_DH_CMapMan:5.7.3.2.2InterPro:6-PGluconate_DH-like_C_sfInterPro:AIM1
EMBL:AK357683EMBL:AK373194InterPro:ClpP/crotonase-like_dom_sfInterPro:Enoyl-CoA_hyd/isom_CSInterPro:Enoyl-CoA_hydra/isoUniProt:F2D1C6
GO:GO:0003674GO:GO:0003824GO:GO:0003857GO:GO:0005575GO:GO:0005622GO:GO:0005623
GO:GO:0005737GO:GO:0005777GO:GO:0006629GO:GO:0006631GO:GO:0006635GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009987GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:HORVU3Hr1G013880
EnsemblPlants:HORVU3Hr1G013880.1InterPro:NAD(P)-bd_dom_sfPFAM:PF00378PFAM:PF00725PFAM:PF02737ScanProsite:PS00067
ScanProsite:PS00166PANTHER:PTHR23309PANTHER:PTHR23309:SF10SUPFAM:SSF48179SUPFAM:SSF51735SUPFAM:SSF52096
UniParc:UPI0002005100SEG:seg::::
Description
Predicted protein [Source:UniProtKB/TrEMBL;Acc:F2D1C6]
Coordinates
chrchr3H:-:30927341..30935804
Molecular Weight (calculated)
78839.5 Da
IEP (calculated)
9.400
GRAVY (calculated)
0.057
Length
728 amino acids
Sequence
(BLAST)
001: MAAAGSIRVT MEVGADGVAL ITICNPPVNA LHPIIIQGLK DKYAEAFHRD DVRAVVLTGA VGKFCGGFDI NVFSKVHDTG DVSHLPDMSF ELVSNMMEDG
101: KKPSVAAIQG LALGGGLELT MGCHARIATP EAQLGLPELT LGVIPGAGGT QRLPRLVGLP KAIEMMLQSK FITAKEGKER GLIDALCSPD ELIKMSRFWA
201: LEIANHRKPW IRSLGRTDRL GSLSEARAVL SMARQQANKA AANMPQHQAC LDVIEEGVLY GGHAGVVKEA KVFKELVVST TSRALVHVFF AQRSTTKVPG
301: VTDIQLKPRN IRKVAVIGGG LMGSGIATAL LVGNISVVLK EVNPQFLQRG QKTIAGNLEG LVKRGSLTKD KMSKAISLLK GALDYSDFKD VDMVIEAVIE
401: KVPLKQSIFA DIEKICPPHC ILATNTSTID LNVVGEKTNS QDRIIGAHFF SPAHIMPLLE IVRTEKTSPQ AILDLITVGK IIKKVPVVVG NCTGFAVNRT
501: FFPYTQGAQL LVSLGIDLFR IDRIISNFGM PMGPFQLQDL AGYGVALAVK DIYAAAFGTR NFDSVLVDLM AETGRQGKSN GKGYYLYEKG ARPKPDPSVQ
601: NVIDEYRRQA KTMPGGKPVT LSDQDILEMV FFPVVNEACR VMDENVVIRA ADLDIASVLG MGFPKYRGGL IFWADTVGAS YIHSKLSKWA EMYGDFFKPS
701: LYLEERAKSG RPLAAPRTAH QVSTRSRM
Best Arabidopsis Sequence Match ( AT4G29010.1 )
(BLAST)
001: MAKKIGVTME VGNDGVAVIT ISNPPVNSLA SPIISGLKEK FRDANQRNDV KAIVLIGNNG RFSGGFDINV FQQVHKTGDL SLMPEVSVEL VCNLMEDSRK
101: PVVAAVEGLA LGGGLELAMA CHARVAAPKA QLGLPELTLG VIPGFGGTQR LPRLVGLAKA TDMILLSKSI SSEEGHKLGL IDALVPPGDV LSTSRKWALD
201: IAEGRKPFLQ SLHRTDKIGS LSEARAILKN SRQLAKKIAP NMPQHHACIE VIEEGIIHGG YSGVLKEAEV FKQLVLSDTA KGLVHVFFAQ RATSKVPNVT
301: DVGLKPRPIK KVAVIGGGLM GSGIATALLL SNIRVVLKEI NSEFLMKGIK SVEANMKSLV SRGKLTQDKA GKALSLFKGV LDYTEFNDVD MVIEAVIENI
401: QLKQNIFKEI EKVCSPHCIL ASNTSTIDLD VIGEKTNSKD RIVGAHFFSP AHLMPLLEIV RSKNTSAQVI LDLMAVGKAI KKVPVVVGNC IGFAVNRTFF
501: PYSQAAHMLA NLGVDLFRID SVITSFGLPL GPFQLGDLAG HGIGLAVGPI YAKVYGDRMF RSPMTELLLK SGRNGKINGR GYYIYEKGSK PKPDPSVLSI
601: VEKSRKLTNI MPGGKPISVT DKEIVEMILF PVVNEACRVL DEGVVIRASD LDIASVLGMS FPSYRGGIVF WADTVGPKYI YERLKKLSET YGSFFKPSRY
701: LEERAMNGML LSESKSSRSK L
Arabidopsis Description
AIM1Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI6]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.