Factsheet for PGSC0003DMT400009982

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 5
plastid 1
mitochondrion 1
plasma membrane 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400014020	Potato	peroxisome	68.4	67.55
GSMUA_Achr7P14420_001	Banana	peroxisome	62.22	61.1
PGSC0003DMT400001017	Potato	cytosol	62.08	61.05
TraesCS3D01G077200.1	Wheat	peroxisome	61.1	59.59
TraesCS6B01G153900.1	Wheat	peroxisome	60.67	59.5
TraesCS6A01G125800.1	Wheat	golgi	60.67	59.5
HORVU3Hr1G013880.1	Barley	peroxisome	60.67	59.34
Os02t0274100-01	Rice	plasma membrane	60.39	59.23
GSMUA_Achr8P19760_001	Banana	peroxisome	60.67	59.1
HORVU6Hr1G024100.1	Barley	peroxisome	60.11	58.95
TraesCS6D01G116200.1	Wheat	golgi, peroxisome	59.97	58.82
EES04919	Sorghum	peroxisome	59.97	58.73
TraesCS3A01G077000.3	Wheat	peroxisome	61.1	58.47
TraesCS3B01G091200.1	Wheat	endoplasmic reticulum, vacuole	56.18	57.72
Zm00001d053308_P009	Maize	peroxisome	60.11	55.66
PGSC0003DMT400011792	Potato	peroxisome	52.39	51.31
PGSC0003DMT400029427	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	18.4	46.45
PGSC0003DMT400046197	Potato	cytosol	17.13	42.51
Zm00001d015992_P001	Maize	peroxisome	59.41	35.19
PGSC0003DMT400032309	Potato	peroxisome	11.24	27.03
PGSC0003DMT400067466	Potato	mitochondrion	9.97	22.83
PGSC0003DMT400003039	Potato	cytosol	8.43	22.64
PGSC0003DMT400035160	Potato	mitochondrion	10.25	21.47

Protein Annotations

KEGG:00062+4.2.1.17+1.1.1.35	KEGG:00071+4.2.1.17+1.1.1.35	KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35	KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8	KEGG:00120+1.1.1.35	KEGG:00280+4.2.1.17+1.1.1.35
KEGG:00281+4.2.1.17+1.1.1.35	KEGG:00310+4.2.1.17+1.1.1.35	KEGG:00360+4.2.1.17	KEGG:00362+4.2.1.17+1.1.1.35	KEGG:00380+4.2.1.17+1.1.1.35	KEGG:00410+4.2.1.17
KEGG:00592+4.2.1.17	KEGG:00623+1.1.1.35	KEGG:00627+4.2.1.17	KEGG:00640+4.2.1.17	KEGG:00650+4.2.1.17+1.1.1.35	KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35
KEGG:00720+4.2.1.17+1.1.1.35	KEGG:00903+4.2.1.17	KEGG:00930+4.2.1.17+1.1.1.35	Gene3D:1.10.1040.50	EntrezGene:102586729	InterPro:3-OHacyl-CoA_DH_CS
InterPro:3-OHacyl-CoA_DH_NAD-bd	Gene3D:3.40.50.720	Gene3D:3.90.226.10	InterPro:3HC_DH_C	MapMan:5.7.3.2.2	InterPro:6-PGluconate_DH-like_C_sf
InterPro:AIM1	InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hydra/iso	GO:GO:0003674	GO:GO:0003824	GO:GO:0003857
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006629
GO:GO:0006631	GO:GO:0006635	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016491	GO:GO:0055114	UniProt:M0ZX92	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00378	PFAM:PF00725
PFAM:PF02737	EnsemblPlantsGene:PGSC0003DMG400003906	PGSC:PGSC0003DMG400003906	EnsemblPlants:PGSC0003DMT400009982	ScanProsite:PS00067	PANTHER:PTHR23309
PANTHER:PTHR23309:SF10	SUPFAM:SSF48179	SUPFAM:SSF51735	SUPFAM:SSF52096	UniParc:UPI000296B869	RefSeq:XP_006354399.1
SEG:seg	:	:	:	:	:

Description

Multifunctional protein [Source:PGSC_GENE;Acc:PGSC0003DMG400003906]

Coordinates

chr8:+:43587612..43593603

Molecular Weight (calculated)

78544.2 Da

IEP (calculated)

7.108

GRAVY (calculated)

0.073

Length

712 amino acids

Sequence
(BLAST)

001: MAINSQLVST EIGKDGIAII RIRNPPVNAL ALSVIDGLKE QYEEAVERND VKAIVLTGDD KFCGGLDINI IQKVQKNGDT SFLPDASVEL VIDTIENGKK
101: PSVAAIQGFA LGGGLELAMG CSARIATSRA ELGLPELKLG LIPGCGGTQR LPRLVGTSKA IEMLMSSKII TSEEGKELGI IDDVVASHED LLTFSRLWAL
201: DIAEGRIART HTLRRTDKIE PIHKSSAILE VKRQQVLKTS PHYKACLDVI EEGIISGGYA GVLKEDKVFR ELVLSKSAKA LLHAYFAERA TSKVPGITDC
301: KLKHRKIEKV AVIGGGLMGS GIATALILSS IQVILKEINF DYLQKSVKSI EVNLHSLVKR GDLLEEKMKK AFSLLKGVVD YEEFTDVDMV MEVVNEEVLL
401: KQSIFEEIEN ICHPHCIFAS NTSTIDLNVI GARTKSQDRI VGTHLFSPAH VMPLLEIVQT ENTSKQVILD VLKFAKIIQK VPIVVKNCTG FAVNRTFFPY
501: MQGAEILANL GIDVYRIDRV ITEFGMRIGP FQLFDLSGYS IFLAVVKEFA AAFPDRTFQC PLVQLMMANG RTGKKNGRGY YLYKKGKIPE PDLSVLQIVE
601: ESRRLASIMP GGEPISVMDQ EIVEMLFFPV VNEACRVIEE RVVVRASDLD VASVHGMKFP SERGGIMYWA DSIGAEYIYA RLKYWSKAYG SFFKPSQFLQ
701: ERATKGIPLA EL

Best Arabidopsis Sequence Match ( AT4G29010.1 )
(BLAST)

001: MAKKIGVTME VGNDGVAVIT ISNPPVNSLA SPIISGLKEK FRDANQRNDV KAIVLIGNNG RFSGGFDINV FQQVHKTGDL SLMPEVSVEL VCNLMEDSRK
101: PVVAAVEGLA LGGGLELAMA CHARVAAPKA QLGLPELTLG VIPGFGGTQR LPRLVGLAKA TDMILLSKSI SSEEGHKLGL IDALVPPGDV LSTSRKWALD
201: IAEGRKPFLQ SLHRTDKIGS LSEARAILKN SRQLAKKIAP NMPQHHACIE VIEEGIIHGG YSGVLKEAEV FKQLVLSDTA KGLVHVFFAQ RATSKVPNVT
301: DVGLKPRPIK KVAVIGGGLM GSGIATALLL SNIRVVLKEI NSEFLMKGIK SVEANMKSLV SRGKLTQDKA GKALSLFKGV LDYTEFNDVD MVIEAVIENI
401: QLKQNIFKEI EKVCSPHCIL ASNTSTIDLD VIGEKTNSKD RIVGAHFFSP AHLMPLLEIV RSKNTSAQVI LDLMAVGKAI KKVPVVVGNC IGFAVNRTFF
501: PYSQAAHMLA NLGVDLFRID SVITSFGLPL GPFQLGDLAG HGIGLAVGPI YAKVYGDRMF RSPMTELLLK SGRNGKINGR GYYIYEKGSK PKPDPSVLSI
601: VEKSRKLTNI MPGGKPISVT DKEIVEMILF PVVNEACRVL DEGVVIRASD LDIASVLGMS FPSYRGGIVF WADTVGPKYI YERLKKLSET YGSFFKPSRY
701: LEERAMNGML LSESKSSRSK L

Arabidopsis Description

AIM1Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI6]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.