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Barley
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Barley
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • mitochondrion 1
  • peroxisome 2
  • endoplasmic reticulum 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:endoplasmic reticulum, mitochondrion, peroxisome
iPSORT:mitochondrion
MultiLoc:peroxisome
WoLF PSORT:endoplasmic reticulum
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
TraesCS6D01G116200.1 Wheat golgi, peroxisome 95.87 95.87
TraesCS6B01G153900.1 Wheat peroxisome 95.45 95.45
TraesCS6A01G125800.1 Wheat golgi 94.35 94.35
HORVU3Hr1G013880.1 Barley peroxisome 91.05 90.8
Os02t0274100-01 Rice plasma membrane 88.02 88.02
EES04919 Sorghum peroxisome 87.6 87.48
Zm00001d053308_P009 Maize peroxisome 86.36 81.53
GSMUA_Achr7P14420_001 Banana peroxisome 73.69 73.79
GSMUA_Achr8P19760_001 Banana peroxisome 69.01 68.54
CDY35240 Canola peroxisome 67.49 67.87
Bra011076.1-P Field mustard peroxisome 67.36 67.73
CDY06852 Canola peroxisome 67.22 67.59
Solyc07g019670.2.1 Tomato plastid 67.08 67.36
CDX97462 Canola peroxisome 66.67 67.13
CDY66477 Canola peroxisome 66.67 67.13
KRH48371 Soybean nucleus 66.8 66.99
Solyc12g007170.1.1 Tomato plastid 66.67 66.85
VIT_11s0016g03690.t01 Wine grape peroxisome 66.53 66.71
AT4G29010.1 Thale cress peroxisome 66.12 66.57
PGSC0003DMT400001017 Potato cytosol 66.12 66.3
CDY69211 Canola mitochondrion, peroxisome 55.37 65.9
KRH39301 Soybean endoplasmic reticulum, mitochondrion, nucleus 65.7 65.88
Bra010347.1-P Field mustard peroxisome 66.39 65.67
HORVU2Hr1G047980.1 Barley peroxisome 12.53 63.19
Bra024170.1-P Field mustard peroxisome 63.22 62.28
Solyc08g068390.2.1 Tomato peroxisome 59.64 60.99
PGSC0003DMT400014020 Potato peroxisome 60.06 60.47
PGSC0003DMT400009982 Potato peroxisome 58.95 60.11
CDX92908 Canola peroxisome 63.77 58.83
HORVU3Hr1G083490.1 Barley cytosol, mitochondrion, peroxisome 11.43 56.85
HORVU3Hr1G015590.13 Barley peroxisome 56.2 55.97
HORVU1Hr1G027810.27 Barley peroxisome 16.67 55.5
HORVU2Hr1G070450.22 Barley endoplasmic reticulum, extracellular, golgi, mitochondrion, plasma membrane, vacuole 31.96 55.24
HORVU1Hr1G058880.12 Barley peroxisome 53.31 53.9
HORVU1Hr1G022450.40 Barley peroxisome 49.31 53.12
Zm00001d015992_P001 Maize peroxisome 86.91 52.5
HORVU7Hr1G111680.1 Barley cytosol, mitochondrion, peroxisome 7.71 48.28
HORVU4Hr1G045170.1 Barley extracellular, mitochondrion, peroxisome 7.58 47.41
HORVU6Hr1G062320.2 Barley mitochondrion 9.78 23.51
HORVU4Hr1G053180.1 Barley peroxisome 8.54 23.13
HORVU6Hr1G062260.3 Barley plastid 8.82 22.07
HORVU3Hr1G059840.4 Barley plastid 9.23 18.61
HORVU6Hr1G021980.6 Barley cytosol 5.23 13.52
HORVU5Hr1G076170.6 Barley plastid 5.1 12.46
Protein Annotations
KEGG:00062+4.2.1.17+1.1.1.35KEGG:00071+4.2.1.17+1.1.1.35KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8KEGG:00120+1.1.1.35KEGG:00280+4.2.1.17+1.1.1.35KEGG:00281+4.2.1.17+1.1.1.35
KEGG:00310+4.2.1.17+1.1.1.35KEGG:00360+4.2.1.17KEGG:00362+4.2.1.17+1.1.1.35KEGG:00380+4.2.1.17+1.1.1.35KEGG:00410+4.2.1.17KEGG:00592+4.2.1.17
KEGG:00623+1.1.1.35KEGG:00627+4.2.1.17KEGG:00640+4.2.1.17KEGG:00650+4.2.1.17+1.1.1.35KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00720+4.2.1.17+1.1.1.35
KEGG:00903+4.2.1.17KEGG:00930+4.2.1.17+1.1.1.35Gene3D:1.10.1040.50InterPro:3-OHacyl-CoA_DH_NAD-bdGene3D:3.40.50.720Gene3D:3.90.226.10
InterPro:3HC_DH_CMapMan:5.7.3.2.2InterPro:6-PGluconate_DH-like_C_sfUniProt:A0A287TLJ0InterPro:AIM1InterPro:ClpP/crotonase-like_dom_sf
ncoils:CoilInterPro:Enoyl-CoA_hyd/isom_CSInterPro:Enoyl-CoA_hydra/isoGO:GO:0003674GO:GO:0003824GO:GO:0003857
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005777GO:GO:0006629
GO:GO:0006631GO:GO:0006635GO:GO:0008150GO:GO:0008152GO:GO:0009056GO:GO:0009987
GO:GO:0016491GO:GO:0055114EnsemblPlantsGene:HORVU6Hr1G024100EnsemblPlants:HORVU6Hr1G024100.1InterPro:NAD(P)-bd_dom_sfPFAM:PF00378
PFAM:PF00725PFAM:PF02737ScanProsite:PS00166PANTHER:PTHR23309PANTHER:PTHR23309:SF10SUPFAM:SSF48179
SUPFAM:SSF51735SUPFAM:SSF52096UniParc:UPI000B465296SEG:seg::
Description
No Description!
Coordinates
chrchr6H:-:83656232..83666923
Molecular Weight (calculated)
78718.7 Da
IEP (calculated)
9.619
GRAVY (calculated)
0.071
Length
726 amino acids
Sequence
(BLAST)
001: MAGSIRVTME VGADGVALIT ICNPPVNALH PIIIQGLKEK YAEAMDRDDV KAIVLTGAAG KFCGGFDINV FTKVHETGDV SLMPDVSVEL VSNMMEDGKK
101: PSVSAIQGLA LGGGLELIMG CHARISTPEA QLGLPELTLG VIPGFGGTQR LPRLVGLPKA IEMMLQSKFI TAKEGKERGL IDALCSPDEL IKMSRFWALE
201: IANYRKPWIR SLGRTDSLGS LSEARAVLSM ARQQAKKVAA NMPQHQACLD VVEEGVLYGG HAGVVKEAKV FKELVVSTTS RALVHVFFAQ RSTTKVPGVT
301: DVQLKPRKIR KIAVIGGGLM GSGIATALLV SNISVVLKEV NPQFLQRGQK TIAGNLEGFV KRGSLTKDKM SKAISLLKGA LDYSDIKDVD MVIEAVIEKV
401: PLKQSIFADI EKICSPHCIL ATNTSTIDLN IVGEKTNSQD RIIGAHFFSP AHIMPLLEIV RTEKTSPQAI LDLITVGKII KKVPVVVGNC TGFAVNRTFF
501: PYGQAAHLLV SLGIDLFRID RVISNFGMPM GPFQLQDVAG YGVALAVKDI YAAAFGTRNF HSGLVELMAK NGRQGKINGK GYYLYEKGGK PKPDPSVQHV
601: IDEYRRQTKT ISGGKLVTLS DRDILEMVFF PVVNEACRVM EENVVIRASD LDIASVLGMG FPKYRGGLIF WADTVGASYI HSKLSKWGEI YGDFFKPSSF
701: LEERAKSGRP LGVQQMAQQA PPRPRM
Best Arabidopsis Sequence Match ( AT4G29010.1 )
(BLAST)
001: MAKKIGVTME VGNDGVAVIT ISNPPVNSLA SPIISGLKEK FRDANQRNDV KAIVLIGNNG RFSGGFDINV FQQVHKTGDL SLMPEVSVEL VCNLMEDSRK
101: PVVAAVEGLA LGGGLELAMA CHARVAAPKA QLGLPELTLG VIPGFGGTQR LPRLVGLAKA TDMILLSKSI SSEEGHKLGL IDALVPPGDV LSTSRKWALD
201: IAEGRKPFLQ SLHRTDKIGS LSEARAILKN SRQLAKKIAP NMPQHHACIE VIEEGIIHGG YSGVLKEAEV FKQLVLSDTA KGLVHVFFAQ RATSKVPNVT
301: DVGLKPRPIK KVAVIGGGLM GSGIATALLL SNIRVVLKEI NSEFLMKGIK SVEANMKSLV SRGKLTQDKA GKALSLFKGV LDYTEFNDVD MVIEAVIENI
401: QLKQNIFKEI EKVCSPHCIL ASNTSTIDLD VIGEKTNSKD RIVGAHFFSP AHLMPLLEIV RSKNTSAQVI LDLMAVGKAI KKVPVVVGNC IGFAVNRTFF
501: PYSQAAHMLA NLGVDLFRID SVITSFGLPL GPFQLGDLAG HGIGLAVGPI YAKVYGDRMF RSPMTELLLK SGRNGKINGR GYYIYEKGSK PKPDPSVLSI
601: VEKSRKLTNI MPGGKPISVT DKEIVEMILF PVVNEACRVL DEGVVIRASD LDIASVLGMS FPSYRGGIVF WADTVGPKYI YERLKKLSET YGSFFKPSRY
701: LEERAMNGML LSESKSSRSK L
Arabidopsis Description
AIM1Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI6]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.