Factsheet for Solyc08g068390.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400014020	Potato	peroxisome	95.77	94.31
GSMUA_Achr7P14420_001	Banana	peroxisome	62.82	61.52
Solyc12g007170.1.1	Tomato	plastid	62.39	61.19
Solyc07g019670.2.1	Tomato	plastid	61.83	60.72
Os02t0274100-01	Rice	plasma membrane	61.13	59.78
HORVU6Hr1G024100.1	Barley	peroxisome	60.99	59.64
TraesCS6D01G116200.1	Wheat	golgi, peroxisome	60.85	59.5
TraesCS6B01G153900.1	Wheat	peroxisome	60.7	59.37
TraesCS6A01G125800.1	Wheat	golgi	60.7	59.37
EES04919	Sorghum	peroxisome	60.7	59.28
TraesCS3D01G077200.1	Wheat	peroxisome	60.7	59.04
HORVU3Hr1G013880.1	Barley	peroxisome	60.14	58.65
TraesCS3A01G077000.3	Wheat	peroxisome	60.42	57.66
TraesCS3B01G091200.1	Wheat	endoplasmic reticulum, vacuole	55.63	57.0
GSMUA_Achr8P19760_001	Banana	peroxisome	58.31	56.63
Zm00001d053308_P009	Maize	peroxisome	60.7	56.05
Solyc12g099440.1.1	Tomato	nucleus	53.52	52.27
Solyc01g066620.2.1	Tomato	plastid	47.75	47.55
Solyc06g009160.2.1	Tomato	cytosol	44.23	42.9
Zm00001d015992_P001	Maize	peroxisome	59.58	35.19
Solyc07g063010.2.1	Tomato	nucleus	12.11	29.05
Solyc08g078130.2.1	Tomato	mitochondrion	10.14	23.15
Solyc01g059830.2.1	Tomato	nucleus, plastid	8.17	21.89
Solyc05g005180.2.1	Tomato	nucleus	9.86	20.77
Solyc05g024240.2.1	Tomato	nucleus	6.62	20.26

Protein Annotations

KEGG:00062+4.2.1.17+1.1.1.35	KEGG:00071+4.2.1.17+1.1.1.35	KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35	KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8	KEGG:00120+1.1.1.35	KEGG:00280+4.2.1.17+1.1.1.35
KEGG:00281+4.2.1.17+1.1.1.35	KEGG:00310+4.2.1.17+1.1.1.35	KEGG:00360+4.2.1.17	KEGG:00362+4.2.1.17+1.1.1.35	KEGG:00380+4.2.1.17+1.1.1.35	KEGG:00410+4.2.1.17
KEGG:00592+4.2.1.17	KEGG:00623+1.1.1.35	KEGG:00627+4.2.1.17	KEGG:00640+4.2.1.17	KEGG:00650+4.2.1.17+1.1.1.35	KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35
KEGG:00720+4.2.1.17+1.1.1.35	KEGG:00903+4.2.1.17	KEGG:00930+4.2.1.17+1.1.1.35	Gene3D:1.10.1040.50	InterPro:3-OHacyl-CoA_DH_CS	InterPro:3-OHacyl-CoA_DH_NAD-bd
Gene3D:3.40.50.720	Gene3D:3.90.226.10	InterPro:3HC_DH_C	MapMan:5.7.3.2.2	InterPro:6-PGluconate_DH-like_C_sf	InterPro:AIM1
InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hydra/iso	GO:GO:0003674	GO:GO:0003676	GO:GO:0003723	GO:GO:0003729
GO:GO:0003824	GO:GO:0003857	GO:GO:0004300	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006629	GO:GO:0006631
GO:GO:0006635	GO:GO:0008017	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016491	GO:GO:0018812	GO:GO:0055114	UniProt:K4CM63	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00378
PFAM:PF00725	PFAM:PF02737	ScanProsite:PS00067	PANTHER:PTHR23309	PANTHER:PTHR23309:SF10	SUPFAM:SSF48179
SUPFAM:SSF51735	SUPFAM:SSF52096	EnsemblPlantsGene:Solyc08g068390.2	EnsemblPlants:Solyc08g068390.2.1	UniParc:UPI000276C89D	SEG:seg

Description

No Description!

Coordinates

chr8:+:57515940..57520831

Molecular Weight (calculated)

77166.7 Da

IEP (calculated)

5.656

GRAVY (calculated)

0.029

Length

710 amino acids

Sequence
(BLAST)

001: MANKGSINME IGNDGVAVIT MINPPVNALT LSAIEELKRC YQEAIDCDNV KAIVLTGADG RFCGGLDISV MENVHKHGDI SLLPDASIGL VVNKIENGKK
101: PSVAAIQGFA LGGGLELAMG CNARISTPKC DLGLPELKLG VIPGCGGTQR LPRLVGTSKA VDMLMSSKTI TSEEGKELGL IDAIVSSDEL LTVARCWALD
201: IVEGRQPNCN SLEKTDKLGP KDESLQILKS ARQSYAVSRY RDCLDVIEEG IVAGGYSGLL KEEKVFKELV LSNTAKGLLH VFLAERASSK VPSVTDTGLK
301: PRRIEKVAVV GGGLMGSGIA TALIISNISV VVKEINHEYL SKALKSVEAN LQGFVTRGKL NQDKMKRTLS LLKGTLDYED LKDVDMVIEA VNENVSLKQS
401: IFEDIEKVCT SECIFASNTS TISLDVIGKR TTSQDRILGI HLFSPAHLMP LVEIVRTENT SPQVIVDVIK FTKILRKVPI VVKNCTGFAV NRSFFPYMQG
501: PDLLANLGVD IFRIDRVITE FGMRLGPFQL QDLSGYGIFL AGVEEFVAAY PDRAFQSPLV QLMVENGREG KKNGKGYYTY NKRSKPEADH SVLQIVEESM
601: RLTNIAPAGK PISVTDEEIL EMIFFPVVNE ACRVIEEGIV VRASDIDIAS VHGFKFPTET GGVMFWADTI GSEYIYSKLK GWYEAYGDFF KPSTFLEQKA
701: AKGLPLGGSC

Best Arabidopsis Sequence Match ( AT4G29010.1 )
(BLAST)

001: MAKKIGVTME VGNDGVAVIT ISNPPVNSLA SPIISGLKEK FRDANQRNDV KAIVLIGNNG RFSGGFDINV FQQVHKTGDL SLMPEVSVEL VCNLMEDSRK
101: PVVAAVEGLA LGGGLELAMA CHARVAAPKA QLGLPELTLG VIPGFGGTQR LPRLVGLAKA TDMILLSKSI SSEEGHKLGL IDALVPPGDV LSTSRKWALD
201: IAEGRKPFLQ SLHRTDKIGS LSEARAILKN SRQLAKKIAP NMPQHHACIE VIEEGIIHGG YSGVLKEAEV FKQLVLSDTA KGLVHVFFAQ RATSKVPNVT
301: DVGLKPRPIK KVAVIGGGLM GSGIATALLL SNIRVVLKEI NSEFLMKGIK SVEANMKSLV SRGKLTQDKA GKALSLFKGV LDYTEFNDVD MVIEAVIENI
401: QLKQNIFKEI EKVCSPHCIL ASNTSTIDLD VIGEKTNSKD RIVGAHFFSP AHLMPLLEIV RSKNTSAQVI LDLMAVGKAI KKVPVVVGNC IGFAVNRTFF
501: PYSQAAHMLA NLGVDLFRID SVITSFGLPL GPFQLGDLAG HGIGLAVGPI YAKVYGDRMF RSPMTELLLK SGRNGKINGR GYYIYEKGSK PKPDPSVLSI
601: VEKSRKLTNI MPGGKPISVT DKEIVEMILF PVVNEACRVL DEGVVIRASD LDIASVLGMS FPSYRGGIVF WADTVGPKYI YERLKKLSET YGSFFKPSRY
701: LEERAMNGML LSESKSSRSK L

Arabidopsis Description

AIM1Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI6]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.