Factsheet for Solyc06g009160.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400046197	Potato	cytosol	37.57	95.82
Solyc12g099440.1.1	Tomato	nucleus	57.24	57.63
GSMUA_Achr2P01720_001	Banana	peroxisome	54.92	55.83
GSMUA_Achr3P24070_001	Banana	cytosol, peroxisome, plastid	51.23	52.37
TraesCS1D01G231000.1	Wheat	golgi, peroxisome, unclear	51.37	52.29
HORVU1Hr1G058880.12	Barley	peroxisome	51.23	52.23
Solyc01g066620.2.1	Tomato	plastid	50.82	52.17
Zm00001d037939_P003	Maize	peroxisome	51.09	52.09
TraesCS1B01G243300.1	Wheat	peroxisome	49.45	52.09
TraesCS1A01G231100.1	Wheat	peroxisome	51.09	52.02
EES18080	Sorghum	peroxisome	50.82	51.81
Os05t0362100-01	Rice	cytosol, mitochondrion, peroxisome	32.1	50.54
Solyc12g007170.1.1	Tomato	plastid	46.99	47.51
Solyc07g019670.2.1	Tomato	plastid	44.95	45.5
Solyc08g068390.2.1	Tomato	peroxisome	42.9	44.23
Solyc01g059830.2.1	Tomato	nucleus, plastid	9.56	26.42
Solyc08g078130.2.1	Tomato	mitochondrion	10.25	24.12
Solyc05g024240.2.1	Tomato	nucleus	7.51	23.71
Solyc07g063010.2.1	Tomato	nucleus	8.47	20.95
Solyc05g005180.2.1	Tomato	nucleus	7.65	16.62

Protein Annotations

KEGG:00062+4.2.1.17+1.1.1.35	KEGG:00071+4.2.1.17+1.1.1.35	KEGG:00120+1.1.1.35	KEGG:00280+4.2.1.17+1.1.1.35	KEGG:00281+4.2.1.17+1.1.1.35	KEGG:00310+4.2.1.17+1.1.1.35
KEGG:00360+4.2.1.17	KEGG:00362+4.2.1.17+1.1.1.35	KEGG:00380+4.2.1.17+1.1.1.35	KEGG:00410+4.2.1.17	KEGG:00592+4.2.1.17	KEGG:00623+1.1.1.35
KEGG:00627+4.2.1.17	KEGG:00640+4.2.1.17	KEGG:00650+4.2.1.17+1.1.1.35	KEGG:00720+4.2.1.17+1.1.1.35	KEGG:00903+4.2.1.17	KEGG:00930+4.2.1.17+1.1.1.35
Gene3D:1.10.1040.50	InterPro:3-OHacyl-CoA_DH_NAD-bd	Gene3D:3.40.50.720	Gene3D:3.90.226.10	InterPro:3HC_DH_C	MapMan:5.7.3.2.2
InterPro:6-PGluconate_DH-like_C_sf	InterPro:ClpP/crotonase-like_dom_sf	ncoils:Coil	InterPro:Enoyl-CoA_hyd/isom_CS	InterPro:Enoyl-CoA_hydra/iso	GO:GO:0003674
GO:GO:0003824	GO:GO:0003857	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005777	GO:GO:0006629	GO:GO:0006631	GO:GO:0006635	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114	UniProt:K4C3U6	InterPro:NAD(P)-bd_dom_sf
PFAM:PF00378	PFAM:PF00725	PFAM:PF02737	ScanProsite:PS00166	PANTHER:PTHR23309	PANTHER:PTHR23309:SF23
SUPFAM:SSF48179	SUPFAM:SSF51735	SUPFAM:SSF52096	EnsemblPlantsGene:Solyc06g009160.2	EnsemblPlants:Solyc06g009160.2.1	UniParc:UPI0002766CCD
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr6:-:3096978..3106355

Molecular Weight (calculated)

80984.5 Da

IEP (calculated)

7.904

GRAVY (calculated)

-0.016

Length

732 amino acids

Sequence
(BLAST)

001: MEKQQRANDG KSTDRKILSE VGEHGVAIIT INRPPLNLLS VDVVLSLKEK IEEAIRKDSV KAIVITGSRG NFSAGFVVTA FGGSQQRKTH RELGFMSIDF
101: ITDTLEASRK PIVAAVEGFC LGGGFEIALA CHARISTSTS KLGLPELQYG ILPGFGGTQR LPRLVGLPKA LEMILTSKRI SGDEACNMCL VDAISPSDQL
201: LGSACQWALD ILECQRPWSI SLFRTDRLAP LAEARTLLNS VRAQIQKQNP NVIHPLVCID VIEHGILCGP RNGLWKEAEA LHELRQSDSC RSLVHVFFAK
301: QNTSKIPGIT DIGLVPRKIN KVAILGGSLM SSEIATVLVL ANYYVIMKYI DQNSLQSGIG RVNANLEGRV KEGRMTQEHY KKACTLLKGV LSYDNFKDVD
401: LVIEDMPDIV SLKQQFFADL DECCPHHCIF ASTTCIVNLD LIGERMKPCR EIVGIHFFSS PSVTDLLEIV RTKRTSPQTL VDLLNFGRRI QKTPIVVQNC
501: TGFAVRHMCF PYLQAAMLLV EHGADVYQID KALTSFGLKL GPFRMLDQDG FLSAAVHDVK FLETFPDRSY KSNLIPIMRK NNGEGKYSCQ GFYTYNDKEE
601: ASPDPEISKY IEMARSMSGI TIRSKLATLS DGEIVEMILF PVLNEACRMI SEAIIVKSSD LDVASVLGMG FPGYRGGIIF WSHSVGSKYI CSKLEEWSKE
701: YGEFFKPCAY LVEQASKRSS LGAQVKQAKS LL

Best Arabidopsis Sequence Match ( AT3G06860.1 )
(BLAST)

001: MDSRTKGKTV MEVGGDGVAV ITLINPPVNS LSFDVLYNLK SNYEEALSRN DVKAIVITGA KGRFSGGFDI SGFGEMQKGN VKEPKAGYIS IDIITDLLEA
101: ARKPSVAAID GLALGGGLEL AMACHARISA PAAQLGLPEL QLGVIPGFGG TQRLPRLVGL TKALEMILTS KPVKAEEGHS LGLIDAVVPP AELVTTARRW
201: ALDIVGRRKP WVSSVSKTDK LPPLGEAREI LTFAKAQTLK RAPNMKHPLM CLDAIEVGIV SGPRAGLEKE AEVASQVVKL DTTKGLIHVF FSQRGTAKVP
301: GVTDRGLVPR KIKKVAIIGG GLMGSGIATA LILSNYPVIL KEVNEKFLEA GIGRVKANLQ SRVRKGSMSQ EKFEKTMSLL KGSLDYESFR DVDMVIEAVI
401: ENISLKQQIF ADLEKYCPQH CILASNTSTI DLNKIGERTK SQDRIVGAHF FSPAHIMPLL EIVRTNHTSA QVIVDLLDVG KKIKKTPVVV GNCTGFAVNR
501: MFFPYTQAAM FLVECGADPY LIDRAISKFG MPMGPFRLCD LVGFGVAIAT ATQFIENFSE RTYKSMIIPL MQEDKRAGEA TRKGFYLYDD KRKAKPDPEL
601: KKYIEKARSI SGVKLDPKLA NLSEKDIIEM TFFPVVNEAC RVFAEGIAVK AADLDIAGIM GMGFPPYRGG IMFWADSIGS KYIYSRLDEW SKAYGEFFKP
701: CAFLAERGSK GVLLSAPVKQ ASSRL

Arabidopsis Description

MFP2Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.