Factsheet for PGSC0003DMT400046197

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
peroxisome 3
mitochondrion 1
cytosol 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g009160.2.1	Tomato	cytosol	95.82	37.57
Os05t0362100-01	Rice	cytosol, mitochondrion, peroxisome	51.22	31.61
PGSC0003DMT400011792	Potato	peroxisome	58.19	22.97
GSMUA_Achr2P01720_001	Banana	peroxisome	55.4	22.08
TraesCS1B01G243300.1	Wheat	peroxisome	51.57	21.3
GSMUA_Achr3P24070_001	Banana	cytosol, peroxisome, plastid	51.57	20.67
HORVU1Hr1G058880.12	Barley	peroxisome	51.57	20.61
TraesCS1D01G231000.1	Wheat	golgi, peroxisome, unclear	51.57	20.58
TraesCS1A01G231100.1	Wheat	peroxisome	51.57	20.58
EES18080	Sorghum	peroxisome	49.83	19.92
Zm00001d037939_P003	Maize	peroxisome	48.08	19.22
PGSC0003DMT400001017	Potato	cytosol	48.43	19.2
PGSC0003DMT400014020	Potato	peroxisome	43.9	17.48
PGSC0003DMT400009982	Potato	peroxisome	42.51	17.13
PGSC0003DMT400032309	Potato	peroxisome	10.1	9.8
PGSC0003DMT400067466	Potato	mitochondrion	4.18	3.86
PGSC0003DMT400003039	Potato	cytosol	2.79	3.02
PGSC0003DMT400035160	Potato	mitochondrion	2.44	2.06
PGSC0003DMT400029427	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	0.0	0.0

Protein Annotations

KEGG:00062+4.2.1.17+1.1.1.35	KEGG:00071+4.2.1.17+1.1.1.35	KEGG:00120+1.1.1.35	KEGG:00280+4.2.1.17+1.1.1.35	KEGG:00281+4.2.1.17+1.1.1.35	KEGG:00310+4.2.1.17+1.1.1.35
KEGG:00360+4.2.1.17	KEGG:00362+4.2.1.17+1.1.1.35	KEGG:00380+4.2.1.17+1.1.1.35	KEGG:00410+4.2.1.17	KEGG:00592+4.2.1.17	KEGG:00623+1.1.1.35
KEGG:00627+4.2.1.17	KEGG:00640+4.2.1.17	KEGG:00650+4.2.1.17+1.1.1.35	KEGG:00720+4.2.1.17+1.1.1.35	KEGG:00903+4.2.1.17	KEGG:00930+4.2.1.17+1.1.1.35
InterPro:3-OHacyl-CoA_DH_NAD-bd	Gene3D:3.40.50.720	Gene3D:3.90.226.10	MapMan:35.1	InterPro:ClpP/crotonase-like_dom_sf	GO:GO:0003674
GO:GO:0003824	GO:GO:0003857	GO:GO:0005575	GO:GO:0006629	GO:GO:0006631	GO:GO:0008150
GO:GO:0008152	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016491	GO:GO:0055114
UniProt:M1BIS1	InterPro:NAD(P)-bd_dom_sf	PFAM:PF02737	EnsemblPlantsGene:PGSC0003DMG400017930	PGSC:PGSC0003DMG400017930	EnsemblPlants:PGSC0003DMT400046197
PANTHER:PTHR23309	PANTHER:PTHR23309:SF23	SUPFAM:SSF51735	SUPFAM:SSF52096	TMHMM:TMhelix	UniParc:UPI0002954399

Description

Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Source:PGSC_GENE;Acc:PGSC0003DMG400017930]

Coordinates

chr6:+:442606..451650

Molecular Weight (calculated)

31957.2 Da

IEP (calculated)

7.588

GRAVY (calculated)

0.064

Length

287 amino acids

Sequence
(BLAST)

001: MILMSKRISG DEACNMCLVD AISPSDQLLG SACQWALDIL ECRRPWSISL FRTDRLAPLA EARTLLNSVR AQIQKQNPNV IHPLVCIDVI EHGILCGPRN
101: GLWKEAEALH ELRQSDSCRS LVHVFFAKQS TSKIPGITDI GLLPRKINKV AILGGSLMSS GIATVLVLAN YYVIMKYIDQ NSLQNGIGRV KANLEGRVKE
201: GRMTQEHYKK ACTLLKGVLS YDNFKDVDLV IEDVPDIVSL KQQYFADLDE CCPPHCIFAS TTCIVNLDLI GEGMKPCREI VGIHFFR

Best Arabidopsis Sequence Match ( AT3G06860.1 )
(BLAST)

001: MDSRTKGKTV MEVGGDGVAV ITLINPPVNS LSFDVLYNLK SNYEEALSRN DVKAIVITGA KGRFSGGFDI SGFGEMQKGN VKEPKAGYIS IDIITDLLEA
101: ARKPSVAAID GLALGGGLEL AMACHARISA PAAQLGLPEL QLGVIPGFGG TQRLPRLVGL TKALEMILTS KPVKAEEGHS LGLIDAVVPP AELVTTARRW
201: ALDIVGRRKP WVSSVSKTDK LPPLGEAREI LTFAKAQTLK RAPNMKHPLM CLDAIEVGIV SGPRAGLEKE AEVASQVVKL DTTKGLIHVF FSQRGTAKVP
301: GVTDRGLVPR KIKKVAIIGG GLMGSGIATA LILSNYPVIL KEVNEKFLEA GIGRVKANLQ SRVRKGSMSQ EKFEKTMSLL KGSLDYESFR DVDMVIEAVI
401: ENISLKQQIF ADLEKYCPQH CILASNTSTI DLNKIGERTK SQDRIVGAHF FSPAHIMPLL EIVRTNHTSA QVIVDLLDVG KKIKKTPVVV GNCTGFAVNR
501: MFFPYTQAAM FLVECGADPY LIDRAISKFG MPMGPFRLCD LVGFGVAIAT ATQFIENFSE RTYKSMIIPL MQEDKRAGEA TRKGFYLYDD KRKAKPDPEL
601: KKYIEKARSI SGVKLDPKLA NLSEKDIIEM TFFPVVNEAC RVFAEGIAVK AADLDIAGIM GMGFPPYRGG IMFWADSIGS KYIYSRLDEW SKAYGEFFKP
701: CAFLAERGSK GVLLSAPVKQ ASSRL

Arabidopsis Description

MFP2Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.