Factsheet for PGSC0003DMT400035160

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 5
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc05g005180.2.1	Tomato	nucleus	97.06	97.92
CDY47214	Canola	cytosol, mitochondrion, peroxisome	78.24	80.61
GSMUA_Achr4P07800_001	Banana	mitochondrion	79.12	80.3
Bra027150.1-P	Field mustard	cytosol, mitochondrion, peroxisome	79.41	79.88
CDY53045	Canola	cytosol, mitochondrion, peroxisome	78.53	78.99
VIT_01s0127g00420.t01	Wine grape	mitochondrion	77.65	78.57
AT1G60550.1	Thale cress	cytosol	77.35	78.04
Zm00001d043970_P001	Maize	mitochondrion	76.76	77.68
TraesCS3B01G268700.1	Wheat	mitochondrion	74.71	76.51
TraesCS3D01G241000.1	Wheat	mitochondrion	74.41	76.2
TraesCS3A01G240600.1	Wheat	mitochondrion	74.41	76.2
Os01t0662700-01	Rice	mitochondrion	73.82	75.83
EES06293	Sorghum	plastid	75.0	75.44
KRH45650	Soybean	nucleus	73.53	73.75
KRG99357	Soybean	nucleus	72.06	72.7
HORVU3Hr1G059840.4	Barley	plastid	74.71	70.56
PGSC0003DMT400003039	Potato	cytosol	22.06	28.3
PGSC0003DMT400067466	Potato	mitochondrion	21.47	23.47
PGSC0003DMT400009982	Potato	peroxisome	21.47	10.25
PGSC0003DMT400014020	Potato	peroxisome	20.88	9.85
PGSC0003DMT400001017	Potato	cytosol	20.88	9.81
PGSC0003DMT400011792	Potato	peroxisome	17.65	8.25
PGSC0003DMT400032309	Potato	peroxisome	3.53	4.05
PGSC0003DMT400029427	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	2.94	3.55
PGSC0003DMT400046197	Potato	cytosol	2.06	2.44

Protein Annotations

KEGG:00130+4.1.3.36	Gene3D:1.10.12.10	EntrezGene:102586636	Gene3D:3.90.226.10	MapMan:7.13.4	InterPro:ClpP/crotonase-like_dom_sf
InterPro:DHNA-CoA_synthase_MenB	InterPro:Enoyl-CoA_hyd/isom_CS	InterPro:Enoyl-CoA_hydra/iso	InterPro:Enoyl-CoA_hydra_C	GO:GO:0003674	GO:GO:0003824
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0008150
GO:GO:0008152	GO:GO:0008935	GO:GO:0009058	GO:GO:0009234	GO:GO:0009987	InterPro:IPR014748
UniProt:M1B1W8	HAMAP:MF_01934	PFAM:PF00378	EnsemblPlantsGene:PGSC0003DMG400013515	PGSC:PGSC0003DMG400013515	EnsemblPlants:PGSC0003DMT400035160
ScanProsite:PS00166	PANTHER:PTHR43113	PANTHER:PTHR43113:SF1	SUPFAM:SSF52096	TIGRFAMs:TIGR01929	UniParc:UPI000295D7B7
RefSeq:XP_006356425.1	SEG:seg	:	:	:	:

Description

Naphthoate synthase [Source:PGSC_GENE;Acc:PGSC0003DMG400013515]

Coordinates

chr5:-:8873846..8878416

Molecular Weight (calculated)

37407.7 Da

IEP (calculated)

8.591

GRAVY (calculated)

-0.344

Length

340 amino acids

Sequence
(BLAST)

001: MSRMSEKDLN TMRRRVASVA NHLLPIPLAQ NVVSSIGSSN CSSSSMNDNY HKIHGEVPNH EPVWRLIPSD DESGKEFTDI IYEKAVGEPI AKITINRPDR
101: RNAFRPHTIK ELIRAFNDAR DDGSVGVIIL TGKGTKAFCS GGDQALRSKD GYADFESFGR LNVLDLQVQI RRLPKPVIAM VAGYAVGGGH ILHMVCDLTI
201: AADNAIFGQT GPKVGSFDAG YGSSIMSRLV GPKKAREMWF LTRFYTASEA EKMGLVNTVV PLDKLEEETI KWCREILRNS PTAIRVLKSA LNAVDDGHAG
301: LQGLGGDATL LFYGTEEGNE GKNAYNERRR PDFSKFPRLP

Best Arabidopsis Sequence Match ( AT1G60550.1 )
(BLAST)

001: MADSNELGSA SRRLSVVTNH LIPIGFSPAR ADSVELCSAS SMDDRFHKVH GEVPTHEVVW KKTDFFGEGD NKEFVDIIYE KALDEGIAKI TINRPERRNA
101: FRPQTVKELM RAFNDARDDS SVGVIILTGK GTKAFCSGGD QALRTQDGYA DPNDVGRLNV LDLQVQIRRL PKPVIAMVAG YAVGGGHILH MVCDLTIAAD
201: NAIFGQTGPK VGSFDAGYGS SIMSRLVGPK KAREMWFMTR FYTASEAEKM GLINTVVPLE DLEKETVKWC REILRNSPTA IRVLKAALNA VDDGHAGLQG
301: LGGDATLLFY GTEEATEGRT AYMHRRPPDF SKFHRRP

Arabidopsis Description

MENB1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8GYN9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.