Factsheet for TraesCS3A01G240600.1

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G241000.1	Wheat	mitochondrion	98.49	98.49
TraesCS3B01G268700.1	Wheat	mitochondrion	97.89	97.89
Os01t0662700-01	Rice	mitochondrion	92.17	92.45
Zm00001d043970_P001	Maize	mitochondrion	91.57	90.48
HORVU3Hr1G059840.4	Barley	plastid	97.29	89.72
EES06293	Sorghum	plastid	89.76	88.17
Solyc05g005180.2.1	Tomato	nucleus	75.9	74.78
VIT_01s0127g00420.t01	Wine grape	mitochondrion	75.6	74.7
PGSC0003DMT400035160	Potato	mitochondrion	76.2	74.41
KRH45650	Soybean	nucleus	75.9	74.34
CDY47214	Canola	cytosol, mitochondrion, peroxisome	72.59	73.03
KRG99357	Soybean	nucleus	73.8	72.7
AT1G60550.1	Thale cress	cytosol	73.49	72.4
Bra027150.1-P	Field mustard	cytosol, mitochondrion, peroxisome	73.49	72.19
CDY53045	Canola	cytosol, mitochondrion, peroxisome	72.29	71.01
GSMUA_Achr4P07830_001	Banana	cytosol, mitochondrion, peroxisome	36.75	61.31
TraesCS4A01G122800.1	Wheat	peroxisome	21.08	26.12
TraesCS3A01G438000.1	Wheat	peroxisome	20.18	23.1
TraesCS3A01G438100.1	Wheat	peroxisome	19.88	22.76
TraesCS1A01G096200.2	Wheat	peroxisome	21.08	9.59
TraesCS3A01G077000.3	Wheat	peroxisome	20.78	9.27
TraesCS6A01G125800.1	Wheat	golgi	20.18	9.23
TraesCS1A01G231100.1	Wheat	peroxisome	19.58	9.04
TraesCS3A01G086700.2	Wheat	peroxisome	18.67	8.56
TraesCS3A01G327700.1	Wheat	peroxisome	3.61	3.95

Protein Annotations

KEGG:00130+4.1.3.36	Gene3D:1.10.12.10	Gene3D:3.90.226.10	MapMan:7.13.4	InterPro:ClpP/crotonase-like_dom_sf	InterPro:DHNA-CoA_synthase_MenB
InterPro:Enoyl-CoA_hyd/isom_CS	InterPro:Enoyl-CoA_hydra/iso	InterPro:Enoyl-CoA_hydra_C	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0008935	GO:GO:0009058	GO:GO:0009234	GO:GO:0009987	InterPro:IPR014748
HAMAP:MF_01934	PFAM:PF00378	ScanProsite:PS00166	PANTHER:PTHR43113	PANTHER:PTHR43113:SF1	SUPFAM:SSF52096
TIGRFAMs:TIGR01929	EnsemblPlantsGene:TraesCS3A01G240600	EnsemblPlants:TraesCS3A01G240600.1	TIGR:cd06558	SEG:seg	:

Description

No Description!

Coordinates

chr3A:-:451715590..451718695

Molecular Weight (calculated)

35981.9 Da

IEP (calculated)

8.447

GRAVY (calculated)

-0.233

Length

332 amino acids

Sequence
(BLAST)

001: MDAAERRLAR VTAHLLPSSF PLASAPLLAP SPAAASSSPA GDSYRRVHGD VSSEPPEWRA ATDEDGKGFV DIIYEKSVGE GIAKITINRP DRRNAFRPLT
101: VKELMRAFSD ARDDSAIGVV ILTGKGSKAF CSGGDQALRD SDGYVDFDSF GRLNVLDLQV QIRRLPKPVI AMVAGYAVGG GHVLHMVCDL TIAADNAIFG
201: QTGPKVGSFD AGYGSSIMSR LVGPKKAREM WFLSRFYAAE EAERMGLVNV VVPLADLEHE TVKWCRQILR NSPTAIRVLK SALNAADDGH AGLQELGGNA
301: TLIFYGTEEA KEGKNAYMER RRPDFSKFPR KP

Best Arabidopsis Sequence Match ( AT1G60550.1 )
(BLAST)

001: MADSNELGSA SRRLSVVTNH LIPIGFSPAR ADSVELCSAS SMDDRFHKVH GEVPTHEVVW KKTDFFGEGD NKEFVDIIYE KALDEGIAKI TINRPERRNA
101: FRPQTVKELM RAFNDARDDS SVGVIILTGK GTKAFCSGGD QALRTQDGYA DPNDVGRLNV LDLQVQIRRL PKPVIAMVAG YAVGGGHILH MVCDLTIAAD
201: NAIFGQTGPK VGSFDAGYGS SIMSRLVGPK KAREMWFMTR FYTASEAEKM GLINTVVPLE DLEKETVKWC REILRNSPTA IRVLKAALNA VDDGHAGLQG
301: LGGDATLLFY GTEEATEGRT AYMHRRPPDF SKFHRRP

Arabidopsis Description

MENB1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8GYN9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.