Factsheet for Zm00001d043970_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
mitochondrion 5
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES06293	Sorghum	plastid	94.94	94.38
TraesCS3A01G240600.1	Wheat	mitochondrion	90.48	91.57
TraesCS3D01G241000.1	Wheat	mitochondrion	90.18	91.27
TraesCS3B01G268700.1	Wheat	mitochondrion	90.18	91.27
Os01t0662700-01	Rice	mitochondrion	89.58	90.94
HORVU3Hr1G059840.4	Barley	plastid	88.99	83.06
PGSC0003DMT400035160	Potato	mitochondrion	77.68	76.76
Solyc05g005180.2.1	Tomato	nucleus	76.79	76.56
VIT_01s0127g00420.t01	Wine grape	mitochondrion	76.19	76.19
CDY47214	Canola	cytosol, mitochondrion, peroxisome	73.51	74.85
Bra027150.1-P	Field mustard	cytosol, mitochondrion, peroxisome	74.4	73.96
KRH45650	Soybean	nucleus	74.4	73.75
AT1G60550.1	Thale cress	cytosol	73.21	73.0
CDY53045	Canola	cytosol, mitochondrion, peroxisome	73.21	72.78
KRG99357	Soybean	nucleus	72.62	72.4
GSMUA_Achr4P07830_001	Banana	cytosol, mitochondrion, peroxisome	37.2	62.81
Zm00001d028909_P001	Maize	extracellular, mitochondrion	20.83	26.02
Zm00001d017459_P002	Maize	mitochondrion	22.92	25.41
Zm00001d011971_P001	Maize	mitochondrion, peroxisome	21.73	25.35
Zm00001d017458_P003	Maize	mitochondrion	20.83	21.54
Zm00001d037939_P003	Maize	peroxisome	19.64	9.19
Zm00001d053308_P009	Maize	peroxisome	20.54	8.97
Zm00001d009182_P009	Maize	extracellular, mitochondrion, peroxisome, plasma membrane	18.15	8.44
Zm00001d015992_P001	Maize	peroxisome	20.24	5.66
Zm00001d012590_P001	Maize	extracellular	3.27	3.68

Protein Annotations

KEGG:00130+4.1.3.36	Gene3D:1.10.12.10	EntrezGene:100304279	Gene3D:3.90.226.10	MapMan:7.13.4	EMBL:BT060667
UniProt:C0HEB1	InterPro:ClpP/crotonase-like_dom_sf	InterPro:DHNA-CoA_synthase_MenB	InterPro:Enoyl-CoA_hyd/isom_CS	InterPro:Enoyl-CoA_hydra/iso	InterPro:Enoyl-CoA_hydra_C
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0008935	GO:GO:0009058
GO:GO:0009234	GO:GO:0009987	InterPro:IPR014748	HAMAP:MF_01934	ProteinID:ONM39541.1	PFAM:PF00378
ScanProsite:PS00166	PANTHER:PTHR43113	PANTHER:PTHR43113:SF1	SUPFAM:SSF52096	TIGRFAMs:TIGR01929	UniParc:UPI00019489F8
EnsemblPlantsGene:Zm00001d043970	EnsemblPlants:Zm00001d043970_P001	EnsemblPlants:Zm00001d043970_T001	SEG:seg	:	:

Description

No Description!

Coordinates

chr3:+:215386427..215388902

Molecular Weight (calculated)

36508.5 Da

IEP (calculated)

8.447

GRAVY (calculated)

-0.293

Length

336 amino acids

Sequence
(BLAST)

001: MDAAERRLAR VAAHLVPSFP VPHATGPPLA PSPAAASSSS SSPAGDSYRR VHGDVPSEPP EWRTATDESG KEFVDIIYEK AVGEGIAKIT INRPDRRNAF
101: RPLTVKELMR AFNDARDDSS IGVIILTGKG TKAFCSGGDQ ALRDSDGYVD FDSFGRLNVL DLQVQIRRLP KPVIAMVAGY AVGGGHVLHM VCDITIAAEN
201: AIFGQTGPKV GSFDAGYGSS IMSRLVGPKR AREMWFLSRF YTADEADKMG LVNTVVPLAE LEQETVKWCR QILRNSPMAI RVLKSALNAA DDGHAGLQEL
301: GGNATLIFYG TEEAKEGKNA YMERRRPDFS KFPRKP

Best Arabidopsis Sequence Match ( AT1G60550.1 )
(BLAST)

001: MADSNELGSA SRRLSVVTNH LIPIGFSPAR ADSVELCSAS SMDDRFHKVH GEVPTHEVVW KKTDFFGEGD NKEFVDIIYE KALDEGIAKI TINRPERRNA
101: FRPQTVKELM RAFNDARDDS SVGVIILTGK GTKAFCSGGD QALRTQDGYA DPNDVGRLNV LDLQVQIRRL PKPVIAMVAG YAVGGGHILH MVCDLTIAAD
201: NAIFGQTGPK VGSFDAGYGS SIMSRLVGPK KAREMWFMTR FYTASEAEKM GLINTVVPLE DLEKETVKWC REILRNSPTA IRVLKAALNA VDDGHAGLQG
301: LGGDATLLFY GTEEATEGRT AYMHRRPPDF SKFHRRP

Arabidopsis Description

MENB1,4-dihydroxy-2-naphthoyl-CoA synthase, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q8GYN9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.