Factsheet for PGSC0003DMT400011792

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g099440.1.1	Tomato	nucleus	98.49	98.49
VIT_05s0077g02140.t01	Wine grape	peroxisome	82.67	83.01
KRH50818	Soybean	nucleus	80.06	80.39
KRH02269	Soybean	peroxisome	79.23	79.67
CDY24662	Canola	peroxisome	77.99	78.1
CDY08028	Canola	peroxisome	77.72	77.82
Bra029608.1-P	Field mustard	peroxisome	77.58	77.79
KRH02268	Soybean	nucleus	77.03	77.56
CDY05296	Canola	peroxisome	77.3	77.52
CDX74076	Canola	peroxisome	77.3	77.41
CDY34924	Canola	peroxisome	77.3	77.3
Bra001221.1-P	Field mustard	peroxisome	77.03	77.24
AT3G06860.1	Thale cress	peroxisome	77.03	77.24
Bra040296.1-P	Field mustard	peroxisome	76.75	76.97
PGSC0003DMT400029427	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	29.85	76.95
GSMUA_Achr2P01720_001	Banana	peroxisome	75.52	76.25
TraesCS1A01G231100.1	Wheat	peroxisome	66.71	67.45
Zm00001d037939_P003	Maize	peroxisome	66.58	67.41
EES18080	Sorghum	peroxisome	66.3	67.13
TraesCS1B01G243300.1	Wheat	peroxisome	63.82	66.76
TraesCS1D01G231000.1	Wheat	golgi, peroxisome, unclear	65.89	66.62
HORVU1Hr1G058880.12	Barley	peroxisome	65.34	66.16
Os05t0362100-01	Rice	cytosol, mitochondrion, peroxisome	41.13	64.3
GSMUA_Achr3P24070_001	Banana	cytosol, peroxisome, plastid	63.27	64.25
KRG94502	Soybean	peroxisome	19.26	60.34
PGSC0003DMT400046197	Potato	cytosol	22.97	58.19
PGSC0003DMT400001017	Potato	cytosol	57.91	58.15
PGSC0003DMT400014020	Potato	peroxisome	52.41	52.84
PGSC0003DMT400009982	Potato	peroxisome	51.31	52.39
PGSC0003DMT400032309	Potato	peroxisome	10.73	26.35
PGSC0003DMT400003039	Potato	cytosol	9.08	24.91
PGSC0003DMT400067466	Potato	mitochondrion	10.04	23.47
PGSC0003DMT400035160	Potato	mitochondrion	8.25	17.65

Protein Annotations

KEGG:00062+4.2.1.17+1.1.1.35	KEGG:00071+4.2.1.17+1.1.1.35	KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35	KEGG:00120+1.1.1.35	KEGG:00280+4.2.1.17+1.1.1.35	KEGG:00281+4.2.1.17+1.1.1.35
KEGG:00310+4.2.1.17+1.1.1.35	KEGG:00360+4.2.1.17	KEGG:00362+4.2.1.17+1.1.1.35	KEGG:00380+4.2.1.17+1.1.1.35	KEGG:00410+4.2.1.17	KEGG:00592+4.2.1.17
KEGG:00623+1.1.1.35	KEGG:00627+4.2.1.17	KEGG:00640+4.2.1.17	KEGG:00650+4.2.1.17+1.1.1.35	KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35	KEGG:00720+4.2.1.17+1.1.1.35
KEGG:00903+4.2.1.17	KEGG:00930+4.2.1.17+1.1.1.35	Gene3D:1.10.1040.50	EntrezGene:102579434	InterPro:3-OHacyl-CoA_DH_CS	InterPro:3-OHacyl-CoA_DH_NAD-bd
Gene3D:3.40.50.720	Gene3D:3.90.226.10	InterPro:3HC_DH_C	MapMan:5.7.3.2.2	InterPro:6-PGluconate_DH-like_C_sf	InterPro:ClpP/crotonase-like_dom_sf
InterPro:Enoyl-CoA_hyd/isom_CS	InterPro:Enoyl-CoA_hydra/iso	GO:GO:0003674	GO:GO:0003824	GO:GO:0003857	GO:GO:0006629
GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491	GO:GO:0055114
UniProt:M1A065	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00378	PFAM:PF00725	PFAM:PF02737	EnsemblPlantsGene:PGSC0003DMG400004630
PGSC:PGSC0003DMG400004630	EnsemblPlants:PGSC0003DMT400011792	ScanProsite:PS00067	ScanProsite:PS00166	PANTHER:PTHR23309	PANTHER:PTHR23309:SF23
SUPFAM:SSF48179	SUPFAM:SSF51735	SUPFAM:SSF52096	UniParc:UPI000296B0FD	RefSeq:XP_006349823.1	SEG:seg

Description

Glyoxysomal fatty acid beta-oxidation multifunctional protein [Source:PGSC_GENE;Acc:PGSC0003DMG400004630]

Coordinates

chr12:+:60134437..60142953

Molecular Weight (calculated)

79333.0 Da

IEP (calculated)

9.446

GRAVY (calculated)

-0.013

Length

727 amino acids

Sequence
(BLAST)

001: MSKSSNPKGR TTIEVGADGV AVITIINPPV NSLALDVLYS LKENYDQALR RDDVKAIVVT GANGRFSGGF DIGAFGKLQG GTVESPKPGF ISVEILTDTV
101: EAARKPSVAA IDGLALGGGL EVAMACHARI STPNAQLGLP ELQLGILPGF GGTQRLPRLV GLAKSLEMML TSKPVKGEEA VNLGLVDAVV PSNQLLDTAR
201: KWALDILECR KPWVASLHKT DKIEPLGEAR EILKFARVQT RRQAPNLQHP LVVIDVVEEG IVSGPRAGLW KEAEAFQSLL HSDTCKALVN VFFAQRATTK
301: VPGVTDLGLK PRRIKKVAIL GGGLMGSGIA TALLLSNYPV ILKEVNDKFL QAGLGRVKAN LQSSVKKGKM SQEKFEKTLS LLKGALDYED FRDVDMVIEA
401: VIENVSLKQQ IFADLEKYCP PHCILGSNTS TIDLNLIGEK TKSQDRIIGA HFFSPAHVMP LLEIVRTQKT SPQVIVDLLD VGKKIRKTPV VVGNCTGFAV
501: NRMFFPYTQA ALLLVERGAD VFRIDRVITK FGMPMGPFRL CDLVGFGVAI ATGGQFVMNF PERTYKSMLI PLMQEDKRAG ETTRKGFYVY DDRRKASPDP
601: EIKKYIEKAR EMSGVTIDPK MAKLSDKDII EMIFFPVVNE ACRVLAEGIA VKSSDLDISA IMGMGFTPYR GGIIFWADTL GSKYIYSRLD EWSRMYGDFF
701: KPCSYLAERA SKGAPLSATT DSAKSRL

Best Arabidopsis Sequence Match ( AT3G06860.1 )
(BLAST)

001: MDSRTKGKTV MEVGGDGVAV ITLINPPVNS LSFDVLYNLK SNYEEALSRN DVKAIVITGA KGRFSGGFDI SGFGEMQKGN VKEPKAGYIS IDIITDLLEA
101: ARKPSVAAID GLALGGGLEL AMACHARISA PAAQLGLPEL QLGVIPGFGG TQRLPRLVGL TKALEMILTS KPVKAEEGHS LGLIDAVVPP AELVTTARRW
201: ALDIVGRRKP WVSSVSKTDK LPPLGEAREI LTFAKAQTLK RAPNMKHPLM CLDAIEVGIV SGPRAGLEKE AEVASQVVKL DTTKGLIHVF FSQRGTAKVP
301: GVTDRGLVPR KIKKVAIIGG GLMGSGIATA LILSNYPVIL KEVNEKFLEA GIGRVKANLQ SRVRKGSMSQ EKFEKTMSLL KGSLDYESFR DVDMVIEAVI
401: ENISLKQQIF ADLEKYCPQH CILASNTSTI DLNKIGERTK SQDRIVGAHF FSPAHIMPLL EIVRTNHTSA QVIVDLLDVG KKIKKTPVVV GNCTGFAVNR
501: MFFPYTQAAM FLVECGADPY LIDRAISKFG MPMGPFRLCD LVGFGVAIAT ATQFIENFSE RTYKSMIIPL MQEDKRAGEA TRKGFYLYDD KRKAKPDPEL
601: KKYIEKARSI SGVKLDPKLA NLSEKDIIEM TFFPVVNEAC RVFAEGIAVK AADLDIAGIM GMGFPPYRGG IMFWADSIGS KYIYSRLDEW SKAYGEFFKP
701: CAFLAERGSK GVLLSAPVKQ ASSRL

Arabidopsis Description

MFP2Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.