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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: nucleus

Predictor Summary:
  • cytosol 1
  • mitochondrion 1
  • peroxisome 4
Predictors GFP MS/MS Papers
Winner Takes All:nucleus
Any Predictor:mitochondrion, peroxisome
BaCelLo:cytosol
iPSORT:mitochondrion
MultiLoc:peroxisome
PProwler:peroxisome
WoLF PSORT:peroxisome
YLoc:peroxisome
 nucleus: 21132161
endoplasmic reticulum: 28499913
nucleus: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH02269 Soybean peroxisome 96.82 96.96
KRH50819 Soybean cytosol, extracellular, peroxisome 8.98 90.28
KRH02268 Soybean nucleus 89.36 89.61
KRH25463 Soybean extracellular 9.81 83.53
VIT_05s0077g02140.t01 Wine grape peroxisome 82.18 82.18
PGSC0003DMT400011792 Potato peroxisome 80.39 80.06
Solyc12g099440.1.1 Tomato nucleus 80.11 79.78
AT3G06860.1 Thale cress peroxisome 78.04 77.93
Bra040296.1-P Field mustard peroxisome 76.66 76.55
CDY34924 Canola peroxisome 76.8 76.48
CDY24662 Canola peroxisome 76.66 76.45
Bra029608.1-P Field mustard peroxisome 76.38 76.28
CDY05296 Canola peroxisome 76.11 76.0
CDY08028 Canola peroxisome 76.11 75.9
CDX74076 Canola peroxisome 76.11 75.9
Bra001221.1-P Field mustard peroxisome 75.83 75.72
GSMUA_Achr2P01720_001 Banana peroxisome 75.0 75.42
PGSC0003DMT400029427 Potato endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole 28.31 72.69
KRG94502 Soybean peroxisome 22.38 69.83
Solyc01g066620.2.1 Tomato plastid 68.37 69.42
EES18080 Sorghum peroxisome 66.85 67.41
TraesCS1A01G231100.1 Wheat peroxisome 66.85 67.32
Zm00001d037939_P003 Maize peroxisome 66.57 67.13
HORVU1Hr1G058880.12 Barley peroxisome 66.57 67.13
TraesCS1D01G231000.1 Wheat golgi, peroxisome, unclear 65.88 66.34
TraesCS1B01G243300.1 Wheat peroxisome 62.98 65.61
GSMUA_Achr3P24070_001 Banana cytosol, peroxisome, plastid 62.71 63.41
Os05t0362100-01 Rice cytosol, mitochondrion, peroxisome 40.47 63.01
KRH48371 Soybean nucleus 57.32 57.32
KRH39301 Soybean endoplasmic reticulum, mitochondrion, nucleus 57.04 57.04
KRH55235 Soybean peroxisome 9.39 27.31
KRH57489 Soybean mitochondrion 11.46 26.95
KRH04196 Soybean mitochondrion 11.33 26.11
KRH55427 Soybean nucleus 11.19 25.39
KRH50718 Soybean plastid 5.39 23.49
KRH66641 Soybean peroxisome 8.84 23.44
KRH02364 Soybean peroxisome 8.01 21.89
KRH50717 Soybean mitochondrion, peroxisome 3.45 21.55
KRG99357 Soybean nucleus 8.98 19.29
KRH45650 Soybean nucleus 8.84 18.88
Protein Annotations
KEGG:00062+4.2.1.17+1.1.1.35KEGG:00071+4.2.1.17+1.1.1.35KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00120+1.1.1.35KEGG:00280+4.2.1.17+1.1.1.35KEGG:00281+4.2.1.17+1.1.1.35
KEGG:00310+4.2.1.17+1.1.1.35KEGG:00360+4.2.1.17KEGG:00362+4.2.1.17+1.1.1.35KEGG:00380+4.2.1.17+1.1.1.35KEGG:00410+4.2.1.17KEGG:00592+4.2.1.17
KEGG:00623+1.1.1.35KEGG:00627+4.2.1.17KEGG:00640+4.2.1.17KEGG:00650+4.2.1.17+1.1.1.35KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00720+4.2.1.17+1.1.1.35
KEGG:00903+4.2.1.17KEGG:00930+4.2.1.17+1.1.1.35Gene3D:1.10.1040.50EntrezGene:100777319InterPro:3-OHacyl-CoA_DH_CSInterPro:3-OHacyl-CoA_DH_NAD-bd
Gene3D:3.40.50.720Gene3D:3.90.226.10InterPro:3HC_DH_CMapMan:5.7.3.2.2InterPro:6-PGluconate_DH-like_C_sfUniProt:A0A0R0JBY6
EMBL:ACUP02004716InterPro:ClpP/crotonase-like_dom_sfInterPro:Enoyl-CoA_hydra/isoEnsemblPlantsGene:GLYMA_07G246300GO:GO:0003674GO:GO:0003824
GO:GO:0003857GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005777
GO:GO:0006629GO:GO:0006631GO:GO:0006635GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0016491GO:GO:0055114EnsemblPlants:KRH50818ProteinID:KRH50818ProteinID:KRH50818.1
InterPro:NAD(P)-bd_dom_sfPFAM:PF00378PFAM:PF00725PFAM:PF02737ScanProsite:PS00067PANTHER:PTHR23309
PANTHER:PTHR23309:SF23MetaCyc:PWY-1361MetaCyc:PWY-5109MetaCyc:PWY-5136MetaCyc:PWY-5138MetaCyc:PWY-5177
MetaCyc:PWY-5789MetaCyc:PWY-6435MetaCyc:PWY-6583MetaCyc:PWY-6863MetaCyc:PWY-6883MetaCyc:PWY-6944
MetaCyc:PWY-6945MetaCyc:PWY-6946MetaCyc:PWY-7007MetaCyc:PWY-7046MetaCyc:PWY-7094MetaCyc:PWY-7216
MetaCyc:PWY-735MetaCyc:PWY-7401MetaCyc:PWY-7606MetaCyc:PWY-7654MetaCyc:PWY-7656MetaCyc:PWY-7726
MetaCyc:PWY-7778MetaCyc:PWY-7779MetaCyc:PWY-81SUPFAM:SSF48179SUPFAM:SSF51735SUPFAM:SSF52096
UniParc:UPI0002338C1BSEG:seg::::
Description
hypothetical protein
Coordinates
chr7:+:42520195..42526875
Molecular Weight (calculated)
78953.5 Da
IEP (calculated)
9.446
GRAVY (calculated)
0.005
Length
724 amino acids
Sequence
(BLAST)
001: MGSSRGHTLM EVGPDGVAVI TIVNPPVNSL SFDVLRSLKE SFDQAIQRDD VKAIVVTGAK GKFSGGFDIS AFGGIQEAKE RPKPGWISVE IITDTIEAAR
101: KPSVAAIDGL ALGGGLEVAM ACNARLSTPT AQLGLPELQL GIIPGFGGTQ RLPRLVGLTK GLEMILASKP VKGKEAFSLG LVDGLVSPND LVNTARQWAL
201: DMLGHRRPWI ASLYKTEKLE PLGEAREILK FARAQARKRA PNLQHPLVCI DVIEAGIVAG PRAGLWKEAE AFEGLVRSDT CKSLVHVFFA QRGTSKVPGV
301: TDCGLAPRQV KKVAIIGGGL MGSGIATALI LSNYPVILKE VNEKFLDAGI NRIKANLQSR VKKGKLTKEN FEKTISLLKG SLDYESFRDV DLVIEAVIEN
401: ISLKQQIFSD LEKYCPPHCI LASNTSTIDL NLIGEKTKSQ DRIVGAHFFS PAHVMPLLEI VRTKQTSPQV IVDVLDISKK IKKTPVVVGN CTGFAVNRMF
501: FPYTQAGLLL VERGADVYQI DRIITKFGMP MGPFRLADLV GFGVAIATGT QFIQNFPERT YKSMLIPLLQ EDNRAGETTR KGFYLYDDKR KASPDPELKN
601: YIEKARSISG VSVDPKLAKL QEKDIIEMIF FPVVNEACRV LDEGIAVKAA DLDISAIMGM GFPPYRGGII FWADSLGSKY IYSRLEKWSE LYGEFFKPCA
701: YLAARAAKGI PLSASLEQQA KSRM
Best Arabidopsis Sequence Match ( AT3G06860.1 )
(BLAST)
001: MDSRTKGKTV MEVGGDGVAV ITLINPPVNS LSFDVLYNLK SNYEEALSRN DVKAIVITGA KGRFSGGFDI SGFGEMQKGN VKEPKAGYIS IDIITDLLEA
101: ARKPSVAAID GLALGGGLEL AMACHARISA PAAQLGLPEL QLGVIPGFGG TQRLPRLVGL TKALEMILTS KPVKAEEGHS LGLIDAVVPP AELVTTARRW
201: ALDIVGRRKP WVSSVSKTDK LPPLGEAREI LTFAKAQTLK RAPNMKHPLM CLDAIEVGIV SGPRAGLEKE AEVASQVVKL DTTKGLIHVF FSQRGTAKVP
301: GVTDRGLVPR KIKKVAIIGG GLMGSGIATA LILSNYPVIL KEVNEKFLEA GIGRVKANLQ SRVRKGSMSQ EKFEKTMSLL KGSLDYESFR DVDMVIEAVI
401: ENISLKQQIF ADLEKYCPQH CILASNTSTI DLNKIGERTK SQDRIVGAHF FSPAHIMPLL EIVRTNHTSA QVIVDLLDVG KKIKKTPVVV GNCTGFAVNR
501: MFFPYTQAAM FLVECGADPY LIDRAISKFG MPMGPFRLCD LVGFGVAIAT ATQFIENFSE RTYKSMIIPL MQEDKRAGEA TRKGFYLYDD KRKAKPDPEL
601: KKYIEKARSI SGVKLDPKLA NLSEKDIIEM TFFPVVNEAC RVFAEGIAVK AADLDIAGIM GMGFPPYRGG IMFWADSIGS KYIYSRLDEW SKAYGEFFKP
701: CAFLAERGSK GVLLSAPVKQ ASSRL
Arabidopsis Description
MFP2Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI5]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.