CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
peroxisome 2
mitochondrion 1
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH02364	Soybean	peroxisome	83.13	52.08
VIT_05s0077g00860.t01	Wine grape	peroxisome, plastid	71.69	44.74
AT4G16210.1	Thale cress	peroxisome	68.07	42.64
PGSC0003DMT400003039	Potato	cytosol	68.07	42.64
CDX90535	Canola	peroxisome	65.06	41.7
CDY09705	Canola	cytosol, mitochondrion, peroxisome	65.06	41.7
Solyc01g059830.2.1	Tomato	nucleus, plastid	66.27	41.51
Bra012731.1-P	Field mustard	cytosol, peroxisome, plasma membrane	64.46	41.31
GSMUA_Achr8P10700_001	Banana	mitochondrion, peroxisome, plastid	63.86	40.15
Os03t0310400-01	Rice	extracellular, nucleus, plasma membrane	63.86	39.55
GSMUA_Achr11P...	Banana	mitochondrion, peroxisome, plasma membrane	62.65	39.54
EER94969	Sorghum	peroxisome, plastid	60.84	37.69
HORVU4Hr1G053180.1	Barley	peroxisome	60.84	37.69
Zm00001d028909_P001	Maize	extracellular, mitochondrion	60.84	37.55
TraesCS4D01G183100.1	Wheat	peroxisome	60.24	37.31
TraesCS4B01G182600.1	Wheat	peroxisome	60.24	37.31
TraesCS4A01G122800.1	Wheat	peroxisome	59.64	36.94
KRH66641	Soybean	peroxisome	27.11	16.48
KRG99357	Soybean	nucleus	25.3	12.46
KRH04196	Soybean	mitochondrion	23.49	12.42
KRH45650	Soybean	nucleus	25.3	12.39
KRH57489	Soybean	mitochondrion	21.69	11.69
KRG94502	Soybean	peroxisome	13.86	9.91
KRH48371	Soybean	nucleus	27.11	6.22
KRH39301	Soybean	endoplasmic reticulum, mitochondrion, nucleus	27.11	6.22
KRH02269	Soybean	peroxisome	24.1	5.53
KRH02268	Soybean	nucleus	23.49	5.4
KRH50818	Soybean	nucleus	23.49	5.39
KRH50717	Soybean	mitochondrion, peroxisome	1.2	1.72
KRH55427	Soybean	nucleus	0.6	0.31
KRH55235	Soybean	peroxisome	0.0	0.0
KRH50819	Soybean	cytosol, extracellular, peroxisome	0.0	0.0
KRH25463	Soybean	extracellular	0.0	0.0

Protein Annotations

EMBL:ACUP02004711	EnsemblPlants:KRH50718	EnsemblPlantsGene:GLYMA_07G2392001	Gene3D:3.90.226.10	GO:GO:0003674	GO:GO:0003824
GO:GO:0008150	GO:GO:0008152	InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hydra/iso	PANTHER:PTHR43802	PFAM:PF00378
ProteinID:KRH50718	ProteinID:KRH50718.1	SUPFAM:SSF52096	UniParc:UPI0002961C2E	UniProt:K7L3J3	MapMan:35.1

Description

hypothetical protein

Coordinates

chr7:-:42021238..42023634

Molecular Weight (calculated)

18161.2 Da

IEP (calculated)

8.509

GRAVY (calculated)

0.036

Length

166 amino acids

Sequence
(BLAST)

001: MLISRSVQDR FGSNMDGKSP EKLILVNREP NGVALVTINR PGSLNSLTRP MMVDLAQAFK RLDRDELVRV IILTGSGRSF CSGVDLTAAE DVFKGDVKDP
101: ESDPVVQMEL CRKPIIGAIR GFAVTAGFEI ALACDILVAA KGSKFMDTHA RFGIFPFFPK DQRSLT

Best Arabidopsis Sequence Match ( AT4G16210.1 )
(BLAST)

001: MDQTVSENLI QVKKESGGIA VITINRPKSL NSLTRAMMVD LAKAFKDMDS DESVQVVIFT GSGRSFCSGV DLTAAESVFK GDVKDPETDP VVQMERLRKP
101: IIGAINGFAI TAGFELALAC DILVASRGAK FMDTHARFGI FPSWGLSQKL SRIIGANKAR EVSLTSMPLT ADVAGKLGFV NHVVEEGEAL KKAREIAEAI
201: IKNEQGMVLR IKSVINDGLK LDLGHALTLE KERAHAYYSG MTKEQFRKMQ EFIAGRGSKK PSSKL

Arabidopsis Description

ECHIAProbable enoyl-CoA hydratase 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q6NL24]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.