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Soybean
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Soybean
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, endoplasmic reticulum, nucleus

Predictor Summary:
  • cytosol 2
  • peroxisome 4
  • mitochondrion 1
Predictors GFP MS/MS Papers
Winner Takes All:endoplasmic reticulum, mitochondrion, nucleus
Any Predictor:cytosol, mitochondrion, peroxisome
BaCelLo:cytosol
EpiLoc:peroxisome
MultiLoc:peroxisome
Plant-mPloc:peroxisome
PProwler:mitochondrion
WoLF PSORT:cytosol
YLoc:peroxisome
 nucleus: 21132161
endoplasmic reticulum: 28499913
mitochondrion: 28499913
msms PMID: 21132161 doi
B Cooper, KB Campbell, J Feng, WM Garrett, R Frederick
Soybean Genomics and Improvement Laboratory, USDA-ARS, Beltsville, MD 20705, USA. bret.cooper@ars.usda.gov
msms PMID: 28499913 doi
S Komatsu, X Wang, X Yin, Y Nanjo, H Ohyanagi, K Sakata
Department of Life Science and Informatics, Maebashi Institute of Technology, Maebashi 371-0816, Japan. Electronic address: ksakata@maebashi-it.ac.jp., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan., Institute of Crop Science, National Agriculture and Food Research Organization, Tsukuba 305-8518, Japan; Faculty of Life and Environmental Sciences, University of Tsukuba, Tsukuba 305-8572, Japan. Electronic address: komatsu.setsuko.fu@u.tsukuba.ac.jp., King Abdullah University of Science and Technology (KAUST), Computational Bioscience Research Center (CBRC), Thuwal 23955-6900, Saudi Arabia.
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
KRH48371 Soybean nucleus 96.41 96.41
Solyc07g019670.2.1 Tomato plastid 76.52 76.63
VIT_11s0016g03690.t01 Wine grape peroxisome 75.97 75.97
PGSC0003DMT400001017 Potato cytosol 75.55 75.55
Solyc12g007170.1.1 Tomato plastid 75.55 75.55
AT4G29010.1 Thale cress peroxisome 71.55 71.84
CDX97462 Canola peroxisome 71.41 71.71
CDY35240 Canola peroxisome 71.41 71.61
Bra011076.1-P Field mustard peroxisome 71.27 71.47
CDY66477 Canola peroxisome 71.13 71.43
CDY06852 Canola peroxisome 70.99 71.19
CDY69211 Canola mitochondrion, peroxisome 59.12 70.16
Bra010347.1-P Field mustard peroxisome 70.58 69.62
GSMUA_Achr7P14420_001 Banana peroxisome 69.06 68.97
EES04919 Sorghum peroxisome 68.09 67.81
Os02t0274100-01 Rice plasma membrane 67.13 66.94
HORVU3Hr1G013880.1 Barley peroxisome 67.13 66.76
TraesCS6D01G116200.1 Wheat golgi, peroxisome 66.71 66.53
TraesCS6A01G125800.1 Wheat golgi 66.57 66.39
TraesCS6B01G153900.1 Wheat peroxisome 66.44 66.25
TraesCS3D01G077200.1 Wheat peroxisome 66.71 66.16
HORVU6Hr1G024100.1 Barley peroxisome 65.88 65.7
Bra024170.1-P Field mustard peroxisome 66.3 65.13
TraesCS3A01G077000.3 Wheat peroxisome 66.85 65.05
GSMUA_Achr8P19760_001 Banana peroxisome 65.47 64.84
TraesCS3B01G091200.1 Wheat endoplasmic reticulum, vacuole 61.88 64.65
Zm00001d053308_P009 Maize peroxisome 67.4 63.46
CDX92908 Canola peroxisome 66.3 60.99
KRH02269 Soybean peroxisome 57.04 57.12
KRH50818 Soybean nucleus 57.04 57.04
KRH02268 Soybean nucleus 56.35 56.51
KRH25463 Soybean extracellular 6.08 51.76
KRG94502 Soybean peroxisome 16.44 51.29
KRH50819 Soybean cytosol, extracellular, peroxisome 4.97 50.0
Zm00001d015992_P001 Maize peroxisome 66.99 40.35
KRH55235 Soybean peroxisome 9.94 28.92
KRH55427 Soybean nucleus 12.02 27.27
KRH50718 Soybean plastid 6.22 27.11
KRH57489 Soybean mitochondrion 10.36 24.35
KRH02364 Soybean peroxisome 8.7 23.77
KRH04196 Soybean mitochondrion 10.22 23.57
KRH50717 Soybean mitochondrion, peroxisome 3.59 22.41
KRH66641 Soybean peroxisome 8.29 21.98
KRH45650 Soybean nucleus 9.81 20.94
KRG99357 Soybean nucleus 9.67 20.77
Protein Annotations
KEGG:00062+4.2.1.17+1.1.1.35KEGG:00071+4.2.1.17+1.1.1.35KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8KEGG:00120+1.1.1.35KEGG:00280+4.2.1.17+1.1.1.35KEGG:00281+4.2.1.17+1.1.1.35
KEGG:00310+4.2.1.17+1.1.1.35KEGG:00360+4.2.1.17KEGG:00362+4.2.1.17+1.1.1.35KEGG:00380+4.2.1.17+1.1.1.35KEGG:00410+4.2.1.17KEGG:00592+4.2.1.17
KEGG:00623+1.1.1.35KEGG:00627+4.2.1.17KEGG:00640+4.2.1.17KEGG:00650+4.2.1.17+1.1.1.35KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00720+4.2.1.17+1.1.1.35
KEGG:00903+4.2.1.17KEGG:00930+4.2.1.17+1.1.1.35Gene3D:1.10.1040.50EntrezGene:100798079InterPro:3-OHacyl-CoA_DH_NAD-bdGene3D:3.40.50.720
Gene3D:3.90.226.10InterPro:3HC_DH_CMapMan:5.7.3.2.2InterPro:6-PGluconate_DH-like_C_sfEMBL:ACUP02005930InterPro:AIM1
InterPro:ClpP/crotonase-like_dom_sfInterPro:Enoyl-CoA_hyd/isom_CSInterPro:Enoyl-CoA_hydra/isoEnsemblPlantsGene:GLYMA_09G191700GO:GO:0003674GO:GO:0003824
GO:GO:0003857GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005777
GO:GO:0006629GO:GO:0006631GO:GO:0006635GO:GO:0008150GO:GO:0008152GO:GO:0009056
GO:GO:0009987GO:GO:0016491GO:GO:0055114UniProt:I1L4J2EnsemblPlants:KRH39301ProteinID:KRH39301
ProteinID:KRH39301.1InterPro:NAD(P)-bd_dom_sfPFAM:PF00378PFAM:PF00725PFAM:PF02737ScanProsite:PS00166
PANTHER:PTHR23309PANTHER:PTHR23309:SF10MetaCyc:PWY-1361MetaCyc:PWY-5109MetaCyc:PWY-5136MetaCyc:PWY-5137
MetaCyc:PWY-5138MetaCyc:PWY-5177MetaCyc:PWY-5789MetaCyc:PWY-6435MetaCyc:PWY-6583MetaCyc:PWY-6837
MetaCyc:PWY-6863MetaCyc:PWY-6883MetaCyc:PWY-6944MetaCyc:PWY-6945MetaCyc:PWY-6946MetaCyc:PWY-7007
MetaCyc:PWY-7046MetaCyc:PWY-7094MetaCyc:PWY-7216MetaCyc:PWY-7291MetaCyc:PWY-735MetaCyc:PWY-7401
MetaCyc:PWY-7606MetaCyc:PWY-7654MetaCyc:PWY-7656MetaCyc:PWY-7726MetaCyc:PWY-7778MetaCyc:PWY-7779
MetaCyc:PWY-81SUPFAM:SSF48179SUPFAM:SSF51735SUPFAM:SSF52096TMHMM:TMhelixUniParc:UPI0002339004
SEG:seg:::::
Description
hypothetical protein
Coordinates
chr9:-:41642277..41650060
Molecular Weight (calculated)
78146.0 Da
IEP (calculated)
9.730
GRAVY (calculated)
0.147
Length
724 amino acids
Sequence
(BLAST)
001: MALPKVDFEV GADGVAVITM CNPPVNALAI PIIMGLKNRF DEAARRNDVK AIVLTGKGGR FSGGFDISVM QKVHRTGDSS HLPDVSVELV VNSIEDSKKP
101: VVAAVAGLAL GGGLELAMGC HARVAAPRAQ LGLPELTLGI IPGFGGTQRL PRLIGLSKAV EMMLTSKPIT SEEGRKLGLI DAIVSSEELL NASRLWALEI
201: GERCKPWVRS LHRTDKIGSL SEAREVLRTA RQQVKKTVPH LPQQLACVDV IEHGIVHGGY SGVLKEAEVF KQLVVSDTAK GLINVFFSQR AISKVPGVTD
301: IGLKPRNVKK AAVIGGGLMG SGIATALILG NIHVILKEIN PEFLLKGIKT IEANVNGLVR RGKLTKQKAD AALSLLRGVL DYSEFKDVDL VIEAVIENIS
401: LKQTIFSDLE KICPPHCILA SNTSTIDLDV VGKTTSSQNR IAGAHFFSPA HIMPLLEIIR TDKTSAQVIL DLITVGKIIK KTPVVVGNCT GFAVNKTFFP
501: YSQGAHLLVN LGVDVFRIDT LIRNFGFPIG PFQLQDLAGY GVAVATSKVF ADAFSDRIFK SPLLDLLIKS GRNGKNNGKG YYIYEKAGKP KPDPSILPII
601: EESRRLCNIM PNGKPISVTD QEIVEMILFP VVNEACRVLE DGVVIRASDL DIASVLGMSF PNYRGGIVFW ADLVGANHIY TSLKKWAQLY GNFYKPSRYL
701: EERALKGIPL SAPASSTPKS MARL
Best Arabidopsis Sequence Match ( AT4G29010.1 )
(BLAST)
001: MAKKIGVTME VGNDGVAVIT ISNPPVNSLA SPIISGLKEK FRDANQRNDV KAIVLIGNNG RFSGGFDINV FQQVHKTGDL SLMPEVSVEL VCNLMEDSRK
101: PVVAAVEGLA LGGGLELAMA CHARVAAPKA QLGLPELTLG VIPGFGGTQR LPRLVGLAKA TDMILLSKSI SSEEGHKLGL IDALVPPGDV LSTSRKWALD
201: IAEGRKPFLQ SLHRTDKIGS LSEARAILKN SRQLAKKIAP NMPQHHACIE VIEEGIIHGG YSGVLKEAEV FKQLVLSDTA KGLVHVFFAQ RATSKVPNVT
301: DVGLKPRPIK KVAVIGGGLM GSGIATALLL SNIRVVLKEI NSEFLMKGIK SVEANMKSLV SRGKLTQDKA GKALSLFKGV LDYTEFNDVD MVIEAVIENI
401: QLKQNIFKEI EKVCSPHCIL ASNTSTIDLD VIGEKTNSKD RIVGAHFFSP AHLMPLLEIV RSKNTSAQVI LDLMAVGKAI KKVPVVVGNC IGFAVNRTFF
501: PYSQAAHMLA NLGVDLFRID SVITSFGLPL GPFQLGDLAG HGIGLAVGPI YAKVYGDRMF RSPMTELLLK SGRNGKINGR GYYIYEKGSK PKPDPSVLSI
601: VEKSRKLTNI MPGGKPISVT DKEIVEMILF PVVNEACRVL DEGVVIRASD LDIASVLGMS FPSYRGGIVF WADTVGPKYI YERLKKLSET YGSFFKPSRY
701: LEERAMNGML LSESKSSRSK L
Arabidopsis Description
AIM1Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI6]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.