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Sorghum
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Sorghum
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • cytosol 1
  • peroxisome 5
  • mitochondrion 1
  • plastid 1
Predictors GFP MS/MS Papers
Winner Takes All:peroxisome
Any Predictor:cytosol, mitochondrion, peroxisome, plastid
BaCelLo:cytosol
EpiLoc:peroxisome
iPSORT:mitochondrion
MultiLoc:peroxisome
Plant-mPloc:peroxisome
PProwler:peroxisome
WoLF PSORT:plastid
YLoc:peroxisome
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Zm00001d053308_P009 Maize peroxisome 95.6 90.38
Os02t0274100-01 Rice plasma membrane 89.0 89.12
TraesCS6D01G116200.1 Wheat golgi, peroxisome 88.72 88.84
TraesCS6B01G153900.1 Wheat peroxisome 88.45 88.57
TraesCS6A01G125800.1 Wheat golgi 87.76 87.88
HORVU6Hr1G024100.1 Barley peroxisome 87.48 87.6
HORVU3Hr1G013880.1 Barley peroxisome 87.62 87.5
TraesCS3D01G077200.1 Wheat peroxisome 86.93 86.58
TraesCS3A01G077000.3 Wheat peroxisome 87.21 85.22
TraesCS3B01G091200.1 Wheat endoplasmic reticulum, vacuole 80.74 84.7
GSMUA_Achr7P14420_001 Banana peroxisome 74.42 74.62
GSMUA_Achr8P19760_001 Banana peroxisome 70.43 70.04
Bra011076.1-P Field mustard peroxisome 69.46 69.94
CDY35240 Canola peroxisome 69.33 69.81
CDY06852 Canola peroxisome 69.19 69.67
KRH48371 Soybean nucleus 69.05 69.34
Solyc07g019670.2.1 Tomato plastid 68.78 69.16
CDY66477 Canola peroxisome 68.36 68.93
CDX97462 Canola peroxisome 68.36 68.93
VIT_11s0016g03690.t01 Wine grape peroxisome 68.23 68.51
KRH39301 Soybean endoplasmic reticulum, mitochondrion, nucleus 67.81 68.09
AT4G29010.1 Thale cress peroxisome 67.4 67.96
PGSC0003DMT400001017 Potato cytosol 67.54 67.82
Solyc12g007170.1.1 Tomato plastid 67.4 67.68
CDY69211 Canola mitochondrion, peroxisome 56.53 67.38
Bra010347.1-P Field mustard peroxisome 67.81 67.17
Bra024170.1-P Field mustard peroxisome 64.1 63.23
Solyc08g068390.2.1 Tomato peroxisome 59.28 60.7
CDX92908 Canola peroxisome 65.2 60.23
PGSC0003DMT400014020 Potato peroxisome 59.7 60.19
PGSC0003DMT400009982 Potato peroxisome 58.73 59.97
Zm00001d015992_P001 Maize peroxisome 95.87 57.99
KXG32465 Sorghum peroxisome 57.5 57.81
EES18080 Sorghum peroxisome 55.57 56.27
EES01597 Sorghum peroxisome, plasma membrane 11.97 29.1
OQU85737 Sorghum mitochondrion 9.77 23.28
OQU85735 Sorghum mitochondrion 9.49 22.85
KXG34022 Sorghum peroxisome 9.08 22.45
EER94969 Sorghum peroxisome, plastid 8.12 22.01
EES06293 Sorghum plastid 9.35 20.12
Protein Annotations
KEGG:00062+4.2.1.17+1.1.1.35KEGG:00071+4.2.1.17+1.1.1.35KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8KEGG:00120+1.1.1.35KEGG:00280+4.2.1.17+1.1.1.35
KEGG:00281+4.2.1.17+1.1.1.35KEGG:00310+4.2.1.17+1.1.1.35KEGG:00360+4.2.1.17KEGG:00362+4.2.1.17+1.1.1.35KEGG:00380+4.2.1.17+1.1.1.35KEGG:00410+4.2.1.17
KEGG:00592+4.2.1.17KEGG:00623+1.1.1.35KEGG:00627+4.2.1.17KEGG:00640+4.2.1.17KEGG:00650+4.2.1.17+1.1.1.35KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35
KEGG:00720+4.2.1.17+1.1.1.35KEGG:00903+4.2.1.17KEGG:00930+4.2.1.17+1.1.1.35Gene3D:1.10.1040.50InterPro:3-OHacyl-CoA_DH_CSInterPro:3-OHacyl-CoA_DH_NAD-bd
Gene3D:3.40.50.720Gene3D:3.90.226.10InterPro:3HC_DH_CMapMan:5.7.3.2.2InterPro:6-PGluconate_DH-like_C_sfEntrezGene:8059103
InterPro:AIM1UniProt:C5Y009InterPro:ClpP/crotonase-like_dom_sfEnsemblPlants:EES04919ProteinID:EES04919ProteinID:EES04919.1
InterPro:Enoyl-CoA_hyd/isom_CSInterPro:Enoyl-CoA_hydra/isoGO:GO:0000003GO:GO:0003674GO:GO:0003676GO:GO:0003723
GO:GO:0003729GO:GO:0003824GO:GO:0003857GO:GO:0004300GO:GO:0005488GO:GO:0005515
GO:GO:0005575GO:GO:0005618GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005777
GO:GO:0006629GO:GO:0006631GO:GO:0006635GO:GO:0007275GO:GO:0008017GO:GO:0008150
GO:GO:0008152GO:GO:0009056GO:GO:0009058GO:GO:0009506GO:GO:0009507GO:GO:0009536
GO:GO:0009695GO:GO:0009791GO:GO:0009908GO:GO:0009987GO:GO:0016491GO:GO:0018812
GO:GO:0030312GO:GO:0055114InterPro:NAD(P)-bd_dom_sfPFAM:PF00378PFAM:PF00725PFAM:PF02737
ScanProsite:PS00067ScanProsite:PS00166PANTHER:PTHR23309PANTHER:PTHR23309:SF10MetaCyc:PWY-1361MetaCyc:PWY-5109
MetaCyc:PWY-5136MetaCyc:PWY-5137MetaCyc:PWY-5138MetaCyc:PWY-5177MetaCyc:PWY-5789MetaCyc:PWY-6435
MetaCyc:PWY-6583MetaCyc:PWY-6837MetaCyc:PWY-6863MetaCyc:PWY-6883MetaCyc:PWY-6944MetaCyc:PWY-6945
MetaCyc:PWY-6946MetaCyc:PWY-7007MetaCyc:PWY-7046MetaCyc:PWY-7094MetaCyc:PWY-7216MetaCyc:PWY-7291
MetaCyc:PWY-735MetaCyc:PWY-7401MetaCyc:PWY-7606MetaCyc:PWY-7654MetaCyc:PWY-7656MetaCyc:PWY-7726
MetaCyc:PWY-7778MetaCyc:PWY-7779MetaCyc:PWY-81EnsemblPlantsGene:SORBI_3004G124200SUPFAM:SSF48179SUPFAM:SSF51735
SUPFAM:SSF52096unigene:Sbi.14292UniParc:UPI0001A85391RefSeq:XP_002451943.1SEG:seg:
Description
hypothetical protein
Coordinates
chr4:+:14139570..14147840
Molecular Weight (calculated)
78578.7 Da
IEP (calculated)
9.615
GRAVY (calculated)
0.056
Length
727 amino acids
Sequence
(BLAST)
001: MAAGSIRVTM EVGADGVALI TIANPPVNAL HPIIIAGLKD KYAEAMRRDD VKAIVLTGAG GKFCGGFDIN VFTKVHQTGD VSLMPDVSVE LVSNMMEEGK
101: KPSVAAIQGL ALGGGLELIM GCHARISTPE AQLGLPELTL GIIPGFGGTQ RLPRLVGLPK AIEMMLQSKF ITAKEGKERG LIDALCSPDE LIKTSRLWAL
201: EIANCRKPWM RSLGRTDRLG SLSEARAVLN AARQQAMKIA PNMPQHQACL DVMEEGILYG GQAGVLKEAK VFKELVIAPT SKALVHVFFA QRSTTKVPGV
301: TDVQLKPRPI RKVAVIGGGL MGSGIATSLL VSNISVVLKE VNPQFLQRGE KMIAGNLEGL VKRGSLTKDR MHKAMSLLKG ALDYSDFKDV DMVIEAVIEK
401: IPLKQSIFSD IEKICPKHCI LATNTSTIDL NVVGEKTNSQ DRIIGAHFFS PAHIMPLLEI VRTEKTSPQA ILDLITVGKI IKKVPVVVGN CTGFAVNRTF
501: FPYTQGSHLL VSLGIDVFRI DRVISSFGMP MGPFQLQDVA GYGVALAVKG IYADAFGERN LNSNLVDLMV KDGRQGKVNG KGYYIYEKGG KPKPDPSVKH
601: VLEEYQKQAN TMPGGKPVTL TDQDILEMIF FPVVNEACRV MDENVVIRAS DLDIASVLGM GFPKYRGGLV FWADTVGAPY IHSKLSKWAE IYGPFFKPSS
701: YLEQRAKSGV PLSAKGASQQ GSARSRM
Best Arabidopsis Sequence Match ( AT4G29010.1 )
(BLAST)
001: MAKKIGVTME VGNDGVAVIT ISNPPVNSLA SPIISGLKEK FRDANQRNDV KAIVLIGNNG RFSGGFDINV FQQVHKTGDL SLMPEVSVEL VCNLMEDSRK
101: PVVAAVEGLA LGGGLELAMA CHARVAAPKA QLGLPELTLG VIPGFGGTQR LPRLVGLAKA TDMILLSKSI SSEEGHKLGL IDALVPPGDV LSTSRKWALD
201: IAEGRKPFLQ SLHRTDKIGS LSEARAILKN SRQLAKKIAP NMPQHHACIE VIEEGIIHGG YSGVLKEAEV FKQLVLSDTA KGLVHVFFAQ RATSKVPNVT
301: DVGLKPRPIK KVAVIGGGLM GSGIATALLL SNIRVVLKEI NSEFLMKGIK SVEANMKSLV SRGKLTQDKA GKALSLFKGV LDYTEFNDVD MVIEAVIENI
401: QLKQNIFKEI EKVCSPHCIL ASNTSTIDLD VIGEKTNSKD RIVGAHFFSP AHLMPLLEIV RSKNTSAQVI LDLMAVGKAI KKVPVVVGNC IGFAVNRTFF
501: PYSQAAHMLA NLGVDLFRID SVITSFGLPL GPFQLGDLAG HGIGLAVGPI YAKVYGDRMF RSPMTELLLK SGRNGKINGR GYYIYEKGSK PKPDPSVLSI
601: VEKSRKLTNI MPGGKPISVT DKEIVEMILF PVVNEACRVL DEGVVIRASD LDIASVLGMS FPSYRGGIVF WADTVGPKYI YERLKKLSET YGSFFKPSRY
701: LEERAMNGML LSESKSSRSK L
Arabidopsis Description
AIM1Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI6]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.