Factsheet for GSMUA_Achr8P19760_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 5
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr7P14420_001	Banana	peroxisome	79.89	80.55
Os02t0274100-01	Rice	plasma membrane	70.18	70.66
EES04919	Sorghum	peroxisome	70.04	70.43
TraesCS6B01G153900.1	Wheat	peroxisome	69.63	70.11
TraesCS6A01G125800.1	Wheat	golgi	69.22	69.7
TraesCS6D01G116200.1	Wheat	golgi, peroxisome	68.95	69.42
VIT_11s0016g03690.t01	Wine grape	peroxisome	68.54	69.2
HORVU6Hr1G024100.1	Barley	peroxisome	68.54	69.01
HORVU3Hr1G013880.1	Barley	peroxisome	68.54	68.82
TraesCS3D01G077200.1	Wheat	peroxisome	68.13	68.22
TraesCS3B01G091200.1	Wheat	endoplasmic reticulum, vacuole	64.16	67.68
Solyc07g019670.2.1	Tomato	plastid	66.62	67.36
TraesCS3A01G077000.3	Wheat	peroxisome	68.26	67.07
CDY35240	Canola	peroxisome	66.07	66.9
CDY06852	Canola	peroxisome	65.94	66.76
Bra011076.1-P	Field mustard	peroxisome	65.94	66.76
KRH48371	Soybean	nucleus	65.66	66.3
Solyc12g007170.1.1	Tomato	plastid	65.53	66.16
PGSC0003DMT400001017	Potato	cytosol	65.39	66.02
AT4G29010.1	Thale cress	peroxisome	64.71	65.6
KRH39301	Soybean	endoplasmic reticulum, mitochondrion, nucleus	64.84	65.47
CDX97462	Canola	peroxisome	64.57	65.46
CDY69211	Canola	mitochondrion, peroxisome	54.58	65.41
Zm00001d053308_P009	Maize	peroxisome	68.81	65.41
CDY66477	Canola	peroxisome	64.43	65.33
Bra010347.1-P	Field mustard	peroxisome	64.16	63.9
Bra024170.1-P	Field mustard	peroxisome	61.56	61.06
PGSC0003DMT400009982	Potato	peroxisome	59.1	60.67
Solyc08g068390.2.1	Tomato	peroxisome	56.63	58.31
PGSC0003DMT400014020	Potato	peroxisome	56.77	57.56
GSMUA_Achr2P01720_001	Banana	peroxisome	56.5	57.36
CDX92908	Canola	peroxisome	61.56	57.18
GSMUA_Achr3P24070_001	Banana	cytosol, peroxisome, plastid	51.03	52.09
Zm00001d015992_P001	Maize	peroxisome	69.9	42.51
GSMUA_Achr9P20010_001	Banana	peroxisome	11.22	27.52
GSMUA_Achr7P22470_001	Banana	peroxisome	9.3	23.53
GSMUA_Achr11P...	Banana	mitochondrion, peroxisome, plasma membrane	8.34	23.19
GSMUA_Achr8P10700_001	Banana	mitochondrion, peroxisome, plastid	8.07	22.35
GSMUA_Achr5P18330_001	Banana	mitochondrion	9.44	22.12
GSMUA_Achr4P07800_001	Banana	mitochondrion	9.3	20.3
GSMUA_Achr4P07830_001	Banana	cytosol, mitochondrion, peroxisome	3.83	14.07

Protein Annotations

KEGG:00062+4.2.1.17+1.1.1.35	KEGG:00071+4.2.1.17+1.1.1.35	KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35	KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8	KEGG:00120+1.1.1.35	KEGG:00280+4.2.1.17+1.1.1.35
KEGG:00281+4.2.1.17+1.1.1.35	KEGG:00310+4.2.1.17+1.1.1.35	KEGG:00360+4.2.1.17	KEGG:00362+4.2.1.17+1.1.1.35	KEGG:00380+4.2.1.17+1.1.1.35	KEGG:00410+4.2.1.17
KEGG:00592+4.2.1.17	KEGG:00623+1.1.1.35	KEGG:00627+4.2.1.17	KEGG:00640+4.2.1.17	KEGG:00650+4.2.1.17+1.1.1.35	KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35
KEGG:00720+4.2.1.17+1.1.1.35	KEGG:00903+4.2.1.17	KEGG:00930+4.2.1.17+1.1.1.35	Gene3D:1.10.1040.50	InterPro:3-OHacyl-CoA_DH_CS	InterPro:3-OHacyl-CoA_DH_NAD-bd
Gene3D:3.40.50.720	Gene3D:3.90.226.10	InterPro:3HC_DH_C	MapMan:5.7.3.2.2	InterPro:6-PGluconate_DH-like_C_sf	InterPro:AIM1
InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hyd/isom_CS	InterPro:Enoyl-CoA_hydra/iso	GO:GO:0003674	GO:GO:0003824	GO:GO:0003857
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006629
GO:GO:0006631	GO:GO:0006635	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987
GO:GO:0016491	GO:GO:0055114	EnsemblPlantsGene:GSMUA_Achr8G19760_001	EnsemblPlants:GSMUA_Achr8P19760_001	EnsemblPlants:GSMUA_Achr8T19760_001	UniProt:M0TRX9
InterPro:NAD(P)-bd_dom_sf	PFAM:PF00378	PFAM:PF00725	PFAM:PF02737	ScanProsite:PS00067	ScanProsite:PS00166
PANTHER:PTHR23309	PANTHER:PTHR23309:SF10	SUPFAM:SSF48179	SUPFAM:SSF51735	SUPFAM:SSF52096	UniParc:UPI0002954200
SEG:seg	:	:	:	:	:

Description

Peroxisomal fatty acid beta-oxidation multifunctional protein [Source:GMGC_GENE;Acc:GSMUA_Achr8G19760_001]

Coordinates

chr8:-:24917875..24932147

Molecular Weight (calculated)

79224.4 Da

IEP (calculated)

9.194

GRAVY (calculated)

0.121

Length

731 amino acids

Sequence
(BLAST)

001: MAAVRVTMDV GSDAVAVITI RNPPVNALAL PIVAGLKEKY AEAMSRSDVK AIVLTGEGGK FCGGLDINIF AAVQKTGMVL KGCKIVKFAY TSVELVVNVI
101: EDAPKPSVAA IQGLALGGGL ELAMGCHARV STPEAQLALP ELALGVVPGM GGTQRLPRLV GLPKAIEMLL LSKSIIAKEG KEYGLVDAIA SPEDLLKTSR
201: LWALEIAEQR KPWIISLHRT DRLGSLSEAF ETLTAGRQQA KRIAPNVPQH KACLDAIEEG INFGGYAGLL KEAKVSKELI CSSTTKGLIH VFFAQRATSK
301: VPNVTDVGIR PRKIKRVAII GGGLMGSGIA TSLILNNTPV ILKEIDSNLL QKGLKMIEAN LQSLVKKGSF TIEKMNKALP LLTGVLDYSE FKNVDMVIEA
401: VVEKVSLKQS IFAEIEKACP PHCIFATNTS TIDLHIVGEK THSQDRIIGA HFFSPAHVMP LLEIVRTDKT SPQVILDLMT VGKTIKKVPV VVGNCTGFAV
501: NRTFFPYTQA AQFLVNLGVD LFRIDRVVSS FGMPMGPFQL QDVSGYEVAL AVKDFFASSF RGRTLESELV GLMVKHGRNG KNNGKGYYIY ERGQNPKPDS
601: SVQPIIEECR RRANVMPGGK PVTLSDQEVL EMIFFPVVNE ACRVLAEGVV IQASDLDVAS VLGMSFPNYR GGIVYWADSV GSSSIYEKLN KWTELYGNFF
701: KPSPYLEERA MKGLPLSMLH VAESPQMKAR M

Best Arabidopsis Sequence Match ( AT4G29010.1 )
(BLAST)

001: MAKKIGVTME VGNDGVAVIT ISNPPVNSLA SPIISGLKEK FRDANQRNDV KAIVLIGNNG RFSGGFDINV FQQVHKTGDL SLMPEVSVEL VCNLMEDSRK
101: PVVAAVEGLA LGGGLELAMA CHARVAAPKA QLGLPELTLG VIPGFGGTQR LPRLVGLAKA TDMILLSKSI SSEEGHKLGL IDALVPPGDV LSTSRKWALD
201: IAEGRKPFLQ SLHRTDKIGS LSEARAILKN SRQLAKKIAP NMPQHHACIE VIEEGIIHGG YSGVLKEAEV FKQLVLSDTA KGLVHVFFAQ RATSKVPNVT
301: DVGLKPRPIK KVAVIGGGLM GSGIATALLL SNIRVVLKEI NSEFLMKGIK SVEANMKSLV SRGKLTQDKA GKALSLFKGV LDYTEFNDVD MVIEAVIENI
401: QLKQNIFKEI EKVCSPHCIL ASNTSTIDLD VIGEKTNSKD RIVGAHFFSP AHLMPLLEIV RSKNTSAQVI LDLMAVGKAI KKVPVVVGNC IGFAVNRTFF
501: PYSQAAHMLA NLGVDLFRID SVITSFGLPL GPFQLGDLAG HGIGLAVGPI YAKVYGDRMF RSPMTELLLK SGRNGKINGR GYYIYEKGSK PKPDPSVLSI
601: VEKSRKLTNI MPGGKPISVT DKEIVEMILF PVVNEACRVL DEGVVIRASD LDIASVLGMS FPSYRGGIVF WADTVGPKYI YERLKKLSET YGSFFKPSRY
701: LEERAMNGML LSESKSSRSK L

Arabidopsis Description

AIM1Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI6]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.