Factsheet for PGSC0003DMT400014020

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g068390.2.1	Tomato	peroxisome	94.31	95.77
PGSC0003DMT400009982	Potato	peroxisome	67.55	68.4
GSMUA_Achr7P14420_001	Banana	peroxisome	62.0	61.66
PGSC0003DMT400001017	Potato	cytosol	61.72	61.46
Os02t0274100-01	Rice	plasma membrane	60.61	60.19
HORVU6Hr1G024100.1	Barley	peroxisome	60.47	60.06
TraesCS6B01G153900.1	Wheat	peroxisome	60.33	59.92
TraesCS6A01G125800.1	Wheat	golgi	60.33	59.92
TraesCS6D01G116200.1	Wheat	golgi, peroxisome	60.19	59.78
EES04919	Sorghum	peroxisome	60.19	59.7
TraesCS3D01G077200.1	Wheat	peroxisome	60.33	59.59
HORVU3Hr1G013880.1	Barley	peroxisome	60.06	59.48
TraesCS3A01G077000.3	Wheat	peroxisome	60.33	58.47
TraesCS3B01G091200.1	Wheat	endoplasmic reticulum, vacuole	55.76	58.01
GSMUA_Achr8P19760_001	Banana	peroxisome	57.56	56.77
Zm00001d053308_P009	Maize	peroxisome	60.19	56.44
PGSC0003DMT400011792	Potato	peroxisome	52.84	52.41
PGSC0003DMT400029427	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	18.17	46.45
PGSC0003DMT400046197	Potato	cytosol	17.48	43.9
Zm00001d015992_P001	Maize	peroxisome	59.08	35.44
PGSC0003DMT400032309	Potato	peroxisome	12.21	29.73
PGSC0003DMT400067466	Potato	mitochondrion	9.85	22.83
PGSC0003DMT400003039	Potato	cytosol	8.18	22.26
PGSC0003DMT400035160	Potato	mitochondrion	9.85	20.88

Protein Annotations

KEGG:00062+4.2.1.17+1.1.1.35	KEGG:00071+4.2.1.17+1.1.1.35	KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35	KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35+5.3.3.8	KEGG:00120+1.1.1.35	KEGG:00280+4.2.1.17+1.1.1.35
KEGG:00281+4.2.1.17+1.1.1.35	KEGG:00310+4.2.1.17+1.1.1.35	KEGG:00360+4.2.1.17	KEGG:00362+4.2.1.17+1.1.1.35	KEGG:00380+4.2.1.17+1.1.1.35	KEGG:00410+4.2.1.17
KEGG:00592+4.2.1.17	KEGG:00623+1.1.1.35	KEGG:00627+4.2.1.17	KEGG:00640+4.2.1.17	KEGG:00650+4.2.1.17+1.1.1.35	KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35
KEGG:00720+4.2.1.17+1.1.1.35	KEGG:00903+4.2.1.17	KEGG:00930+4.2.1.17+1.1.1.35	Gene3D:1.10.1040.50	InterPro:3-OHacyl-CoA_DH_CS	InterPro:3-OHacyl-CoA_DH_NAD-bd
Gene3D:3.40.50.720	Gene3D:3.90.226.10	InterPro:3HC_DH_C	MapMan:5.7.3.2.2	InterPro:6-PGluconate_DH-like_C_sf	InterPro:AIM1
InterPro:ClpP/crotonase-like_dom_sf	InterPro:Enoyl-CoA_hydra/iso	GO:GO:0003674	GO:GO:0003824	GO:GO:0003857	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0006629	GO:GO:0006631
GO:GO:0006635	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016491
GO:GO:0055114	UniProt:M1A3M9	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00378	PFAM:PF00725	PFAM:PF02737
EnsemblPlantsGene:PGSC0003DMG400005498	PGSC:PGSC0003DMG400005498	EnsemblPlants:PGSC0003DMT400014020	ScanProsite:PS00067	PANTHER:PTHR23309	PANTHER:PTHR23309:SF10
SUPFAM:SSF48179	SUPFAM:SSF51735	SUPFAM:SSF52096	UniParc:UPI0002965F87	SEG:seg	:

Description

Multifunctional protein [Source:PGSC_GENE;Acc:PGSC0003DMG400005498]

Coordinates

chr8:+:43707916..43713346

Molecular Weight (calculated)

78298.2 Da

IEP (calculated)

5.640

GRAVY (calculated)

0.058

Length

721 amino acids

Sequence
(BLAST)

001: MANKGSINME IGNDGVAVIT MINPPVNALT LSAIEELKRF YQEAIDCDNV KAIVLSGANG RFCGGLDISV MENVHKHGDI SLLPDASIGL VVNKIENGNK
101: PSVAAIQGFA LGGGLELAMG CSARIATPKC DLGLPELKLG VIPGCGGTQR LPRLVGTSKA VDMLMSSKTI TSDEGKELGL IDAIVSSEEL LIVARCWALD
201: IVEGRHPNCN SLEKTDKLGP KDESLEILKS ARQRYTVPRY RACLDVIEEG IVAGGYAGVL KEDKVFKELV LSNTAKGLLH VFLSELATTK VPSVTDIGLK
301: PRRIEKVAVV GGGLMGSGIA TALIISNISV VLKEINHEYL SKALKSVEAN LQGFVTRGKL NQDKMKRTLS LLKGTLDYED LKDVDMVIEA VNENVSLKQS
401: IFEDIEKVCT SECIFASNTS TISLDVIGKR TSSQDRILGI HLFSPAHLMP LVEIVRTENT SPQVIVDVIK FTKILKKVPI VVKNCTGFAV NRSFFPYMQG
501: PDLLANLGVD IFRIDRVITE FGMRLGPFQL QDLTGYGIFL AGVEEFVAAY PDRAFQSPLV QLMVENGREG KKNGKGYYTY NKGSKPEADH SVLQIVEESM
601: RLTNIAPAGK PISVTDEEIL EMIFFPVVNE ACRVIEEGIV VRASDIDIAS VHGFKFPSET QVESRNQATS IGGVMFWADT IGCEYIYSKL KGWYEAYGDF
701: FKPSTFLEQK AAKGLPLGGS C

Best Arabidopsis Sequence Match ( AT4G29010.1 )
(BLAST)

001: MAKKIGVTME VGNDGVAVIT ISNPPVNSLA SPIISGLKEK FRDANQRNDV KAIVLIGNNG RFSGGFDINV FQQVHKTGDL SLMPEVSVEL VCNLMEDSRK
101: PVVAAVEGLA LGGGLELAMA CHARVAAPKA QLGLPELTLG VIPGFGGTQR LPRLVGLAKA TDMILLSKSI SSEEGHKLGL IDALVPPGDV LSTSRKWALD
201: IAEGRKPFLQ SLHRTDKIGS LSEARAILKN SRQLAKKIAP NMPQHHACIE VIEEGIIHGG YSGVLKEAEV FKQLVLSDTA KGLVHVFFAQ RATSKVPNVT
301: DVGLKPRPIK KVAVIGGGLM GSGIATALLL SNIRVVLKEI NSEFLMKGIK SVEANMKSLV SRGKLTQDKA GKALSLFKGV LDYTEFNDVD MVIEAVIENI
401: QLKQNIFKEI EKVCSPHCIL ASNTSTIDLD VIGEKTNSKD RIVGAHFFSP AHLMPLLEIV RSKNTSAQVI LDLMAVGKAI KKVPVVVGNC IGFAVNRTFF
501: PYSQAAHMLA NLGVDLFRID SVITSFGLPL GPFQLGDLAG HGIGLAVGPI YAKVYGDRMF RSPMTELLLK SGRNGKINGR GYYIYEKGSK PKPDPSVLSI
601: VEKSRKLTNI MPGGKPISVT DKEIVEMILF PVVNEACRVL DEGVVIRASD LDIASVLGMS FPSYRGGIVF WADTVGPKYI YERLKKLSET YGSFFKPSRY
701: LEERAMNGML LSESKSSRSK L

Arabidopsis Description

AIM1Peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI6]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.