Factsheet for PGSC0003DMT400029427

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, extracellular, endoplasmic reticulum, vacuole, mitochondrion, plastid, plasma membrane, golgi

Predictor Summary:

cytosol 1
peroxisome 5
mitochondrion 2
plastid 2
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion, peroxisome, plastid, secretory
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	peroxisome
iPSORT:	mitochondrion
MultiLoc:	peroxisome
Plant-mPloc:	peroxisome, plastid
Predotar:	secretory
PProwler:	peroxisome
PTS1:	peroxisome
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc01g066620.2.1	Tomato	plastid	93.26	36.89
PGSC0003DMT400011792	Potato	peroxisome	76.95	29.85
VIT_05s0077g02140.t01	Wine grape	peroxisome	74.82	29.14
KRH50818	Soybean	nucleus	72.69	28.31
KRH02269	Soybean	peroxisome	71.63	27.94
AT3G06860.1	Thale cress	peroxisome	70.57	27.45
Bra029608.1-P	Field mustard	peroxisome	70.57	27.45
CDY05296	Canola	peroxisome	70.57	27.45
CDY24662	Canola	peroxisome	70.57	27.41
KRH02268	Soybean	nucleus	69.5	27.15
CDY34924	Canola	peroxisome	69.86	27.1
Bra001221.1-P	Field mustard	peroxisome	69.5	27.03
Bra040296.1-P	Field mustard	peroxisome	69.5	27.03
CDY08028	Canola	peroxisome	69.5	27.0
CDX74076	Canola	peroxisome	69.5	27.0
GSMUA_Achr2P01720_001	Banana	peroxisome	66.31	25.97
TraesCS1B01G243300.1	Wheat	peroxisome	61.7	25.04
TraesCS1A01G231100.1	Wheat	peroxisome	61.35	24.06
EES18080	Sorghum	peroxisome	60.64	23.82
TraesCS1D01G231000.1	Wheat	golgi, peroxisome, unclear	60.64	23.78
GSMUA_Achr3P24070_001	Banana	cytosol, peroxisome, plastid	59.93	23.6
Zm00001d037939_P003	Maize	peroxisome	59.57	23.4
HORVU1Hr1G058880.12	Barley	peroxisome	59.57	23.4
PGSC0003DMT400001017	Potato	cytosol	50.35	19.61
PGSC0003DMT400009982	Potato	peroxisome	46.45	18.4
PGSC0003DMT400014020	Potato	peroxisome	46.45	18.17
PGSC0003DMT400032309	Potato	peroxisome	12.77	12.16
KRG94502	Soybean	peroxisome	6.74	8.19
PGSC0003DMT400067466	Potato	mitochondrion	6.38	5.79
PGSC0003DMT400003039	Potato	cytosol	4.26	4.53
PGSC0003DMT400035160	Potato	mitochondrion	3.55	2.94
Os05t0362100-01	Rice	cytosol, mitochondrion, peroxisome	2.84	1.72
PGSC0003DMT400046197	Potato	cytosol	0.0	0.0

Protein Annotations

KEGG:00062+4.2.1.17+1.1.1.35	KEGG:00071+4.2.1.17+1.1.1.35	KEGG:00071+5.1.2.3+4.2.1.17+1.1.1.35	KEGG:00120+1.1.1.35	KEGG:00280+4.2.1.17+1.1.1.35	KEGG:00281+4.2.1.17+1.1.1.35
KEGG:00310+4.2.1.17+1.1.1.35	KEGG:00360+4.2.1.17	KEGG:00362+4.2.1.17+1.1.1.35	KEGG:00380+4.2.1.17+1.1.1.35	KEGG:00410+4.2.1.17	KEGG:00592+4.2.1.17
KEGG:00623+1.1.1.35	KEGG:00627+4.2.1.17	KEGG:00640+4.2.1.17	KEGG:00650+4.2.1.17+1.1.1.35	KEGG:00650+5.1.2.3+4.2.1.17+1.1.1.35	KEGG:00720+4.2.1.17+1.1.1.35
KEGG:00903+4.2.1.17	KEGG:00930+4.2.1.17+1.1.1.35	Gene3D:1.10.1040.50	InterPro:3-OHacyl-CoA_DH_CS	InterPro:3-OHacyl-CoA_DH_NAD-bd	Gene3D:3.40.50.720
InterPro:3HC_DH_C	MapMan:5.7.3.2.2	InterPro:6-PGluconate_DH-like_C_sf	GO:GO:0003674	GO:GO:0003824	GO:GO:0003857
GO:GO:0006629	GO:GO:0006631	GO:GO:0008150	GO:GO:0008152	GO:GO:0009987	GO:GO:0016491
GO:GO:0055114	UniProt:M1AST2	InterPro:NAD(P)-bd_dom_sf	PFAM:PF00725	PFAM:PF02737	EnsemblPlantsGene:PGSC0003DMG400011314
PGSC:PGSC0003DMG400011314	EnsemblPlants:PGSC0003DMT400029427	ScanProsite:PS00067	PANTHER:PTHR23309	PANTHER:PTHR23309:SF23	SUPFAM:SSF48179
SUPFAM:SSF51735	UniParc:UPI000296123B	:	:	:	:

Description

Glyoxysomal fatty acid beta-oxidation multifunctional protein [Source:PGSC_GENE;Acc:PGSC0003DMG400011314]

Coordinates

chr1:+:57592460..57601313

Molecular Weight (calculated)

31430.8 Da

IEP (calculated)

9.295

GRAVY (calculated)

0.046

Length

282 amino acids

Sequence
(BLAST)

001: MGLFGRTLCP AHVMPLLEIV RTQNTSPQVI VDLLDVGKKI KKTPVVVRNC TGFAVNRMLF PFTQAALLLV EHGADVYCID SAFTKFGMAM GPFRLFDLVG
101: FNVAMASEAQ FVSSMPGRIY KSMLIPLMQQ DKRLGETTHK GFYLYDERRK AKPDPEIKRY IEKAREISGV SIDPKMAKLS EKDMVEMIFF PSVNEACRLL
201: AEGIVVKASD LDIASVMGVG FPPYRGGIIY WADTVGSKYI CSRLNEWATI YGKNFKPCDY LAEKAARGIP LSGTMDLAKS RL

Best Arabidopsis Sequence Match ( AT3G06860.1 )
(BLAST)

001: MDSRTKGKTV MEVGGDGVAV ITLINPPVNS LSFDVLYNLK SNYEEALSRN DVKAIVITGA KGRFSGGFDI SGFGEMQKGN VKEPKAGYIS IDIITDLLEA
101: ARKPSVAAID GLALGGGLEL AMACHARISA PAAQLGLPEL QLGVIPGFGG TQRLPRLVGL TKALEMILTS KPVKAEEGHS LGLIDAVVPP AELVTTARRW
201: ALDIVGRRKP WVSSVSKTDK LPPLGEAREI LTFAKAQTLK RAPNMKHPLM CLDAIEVGIV SGPRAGLEKE AEVASQVVKL DTTKGLIHVF FSQRGTAKVP
301: GVTDRGLVPR KIKKVAIIGG GLMGSGIATA LILSNYPVIL KEVNEKFLEA GIGRVKANLQ SRVRKGSMSQ EKFEKTMSLL KGSLDYESFR DVDMVIEAVI
401: ENISLKQQIF ADLEKYCPQH CILASNTSTI DLNKIGERTK SQDRIVGAHF FSPAHIMPLL EIVRTNHTSA QVIVDLLDVG KKIKKTPVVV GNCTGFAVNR
501: MFFPYTQAAM FLVECGADPY LIDRAISKFG MPMGPFRLCD LVGFGVAIAT ATQFIENFSE RTYKSMIIPL MQEDKRAGEA TRKGFYLYDD KRKAKPDPEL
601: KKYIEKARSI SGVKLDPKLA NLSEKDIIEM TFFPVVNEAC RVFAEGIAVK AADLDIAGIM GMGFPPYRGG IMFWADSIGS KYIYSRLDEW SKAYGEFFKP
701: CAFLAERGSK GVLLSAPVKQ ASSRL

Arabidopsis Description

MFP2Peroxisomal fatty acid beta-oxidation multifunctional protein MFP2 [Source:UniProtKB/Swiss-Prot;Acc:Q9ZPI5]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.