Factsheet for PGSC0003DMT400067466

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 7
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc08g078130.2.1	Tomato	mitochondrion	97.11	97.11
VIT_02s0234g00080.t01	Wine grape	mitochondrion	69.13	72.88
KRH57489	Soybean	mitochondrion	66.24	66.88
KRH04196	Soybean	mitochondrion	66.56	65.92
GSMUA_Achr5P18330_001	Banana	mitochondrion	62.38	62.18
CDY67750	Canola	mitochondrion	59.81	61.79
AT4G16800.1	Thale cress	mitochondrion	58.84	60.8
Os02t0654100-01	Rice	mitochondrion	57.56	59.67
HORVU6Hr1G062260.3	Barley	plastid	55.63	59.66
OQU85735	Sorghum	mitochondrion	56.91	58.61
Zm00001d017459_P002	Maize	mitochondrion	56.91	58.42
Os02t0654000-01	Rice	mitochondrion	54.34	57.48
TraesCS6D01G224900.1	Wheat	mitochondrion	56.59	56.96
TraesCS6B01G281700.1	Wheat	mitochondrion	54.66	56.29
TraesCS6B01G281600.2	Wheat	mitochondrion	56.59	56.23
OQU85737	Sorghum	mitochondrion	54.02	55.08
HORVU6Hr1G062320.2	Barley	mitochondrion	53.05	54.64
Zm00001d017458_P003	Maize	mitochondrion	52.73	50.46
TraesCS6D01G224800.1	Wheat	mitochondrion	36.66	46.53
PGSC0003DMT400003039	Potato	cytosol	20.58	24.15
Bra021079.1-P	Field mustard	nucleus	59.81	23.94
PGSC0003DMT400035160	Potato	mitochondrion	23.47	21.47
PGSC0003DMT400011792	Potato	peroxisome	23.47	10.04
PGSC0003DMT400009982	Potato	peroxisome	22.83	9.97
PGSC0003DMT400014020	Potato	peroxisome	22.83	9.85
PGSC0003DMT400001017	Potato	cytosol	21.54	9.25
PGSC0003DMT400029427	Potato	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	5.79	6.38
PGSC0003DMT400032309	Potato	peroxisome	5.14	5.41
PGSC0003DMT400046197	Potato	cytosol	3.86	4.18

Protein Annotations

Gene3D:1.10.12.10	EntrezGene:102597786	Gene3D:3.90.226.10	MapMan:4.2.7.5.3	InterPro:ClpP/crotonase-like_dom_sf	ncoils:Coil
InterPro:Enoyl-CoA_hyd/isom_CS	InterPro:Enoyl-CoA_hydra/iso	InterPro:Enoyl-CoA_hydra_C	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	InterPro:IPR014748	UniProt:M1CHB1	PFAM:PF00378	EnsemblPlantsGene:PGSC0003DMG400026228	PGSC:PGSC0003DMG400026228
EnsemblPlants:PGSC0003DMT400067466	ScanProsite:PS00166	PANTHER:PTHR11941	PANTHER:PTHR11941:SF129	SUPFAM:SSF52096	UniParc:UPI000296363B
RefSeq:XP_006359233.1	SEG:seg	:	:	:	:

Description

Methylglutaconyl-CoA hydratase, mitochondrial [Source:PGSC_GENE;Acc:PGSC0003DMG400026228]

Coordinates

chr8:+:51249571..51253726

Molecular Weight (calculated)

33777.9 Da

IEP (calculated)

8.026

GRAVY (calculated)

-0.081

Length

311 amino acids

Sequence
(BLAST)

001: MVVAFVAIAK SVGQQCLKRS KPYSNSYFSS YGVQKWQFQS HRTLILQSAS ESVKLERLSD SDSGILEVKL DRPEARNAIG KDMLRGLQQA FEAVSNERSA
101: NVLMICSSVP KVFCAGADLK ERKTMILSEV QDFVSTLRST FSYLEALHIP TIAAIEGIAL GGGLEMAMSC DIRICGEDAV MGLPETGLAI IPGAGGTQRL
201: PRLVGKSIAK DIIFTGRKIS GKDAGSIGLV NYCVPAGEAR LKALELARDI NQKGPLALRM AKRAIDQGVE LDAESGLALE WDCYEQLLDT KDRVEGLAAF
301: AERRKPQYKG E

Best Arabidopsis Sequence Match ( AT4G16800.1 )
(BLAST)

001: MSFVKYLRRD NLLQLAGKPS LSRNYILQTC RTLIIETSPP EFVKLNRLSG SDSGIIEVNL DRPVTKNAIN KEMLKSLQNA FESIHQDNSA RVVMIRSLVP
101: GVFCAGADLK ERRTMSPSEV HTYVNSLRYM FSFIEALSIP TIAAIEGAAL GGGLEMALAC DLRICGENAV FGLPETGLAI IPGAGGTQRL SRLVGRSVSK
201: ELIFTGRKID AIEAANKGLV NICVTAGEAH EKAIEMAQQI NEKGPLAIKM AKKAIDEGIE TNMASGLEVE EMCYQKLLNT QDRLEGLAAF AEKRKPLYTG
301: N

Arabidopsis Description

Probable enoyl-CoA hydratase 2, mitochondrial [Source:UniProtKB/Swiss-Prot;Acc:F4JML5]
SUBAcon: [mitochondrion]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.