Factsheet for VIT_05s0077g00860.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid

Predictor Summary:

cytosol 1
plastid 4
peroxisome 4

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH50717	Soybean	mitochondrion, peroxisome	36.47	83.62
KRH02364	Soybean	peroxisome	77.82	78.11
CDX90535	Canola	peroxisome	75.19	77.22
CDY09705	Canola	cytosol, mitochondrion, peroxisome	75.19	77.22
Bra012731.1-P	Field mustard	cytosol, peroxisome, plasma membrane	74.81	76.83
AT4G16210.1	Thale cress	peroxisome	76.32	76.6
PGSC0003DMT400003039	Potato	cytosol	75.94	76.23
Solyc01g059830.2.1	Tomato	nucleus, plastid	75.19	75.47
GSMUA_Achr8P10700_001	Banana	mitochondrion, peroxisome, plastid	74.06	74.62
GSMUA_Achr11P...	Banana	mitochondrion, peroxisome, plasma membrane	72.93	73.76
Zm00001d028909_P001	Maize	extracellular, mitochondrion	73.68	72.86
Os03t0310400-01	Rice	extracellular, nucleus, plasma membrane	73.31	72.76
EER94969	Sorghum	peroxisome, plastid	72.56	72.01
KRH50718	Soybean	plastid	44.74	71.69
HORVU4Hr1G053180.1	Barley	peroxisome	70.3	69.78
TraesCS4B01G182600.1	Wheat	peroxisome	69.55	69.03
TraesCS4D01G183100.1	Wheat	peroxisome	69.17	68.66
TraesCS4A01G122800.1	Wheat	peroxisome	68.42	67.91
VIT_02s0234g00080.t01	Wine grape	mitochondrion	26.32	23.73
VIT_01s0146g00270.t01	Wine grape	peroxisome	24.06	23.27
VIT_01s0127g00420.t01	Wine grape	mitochondrion	28.2	22.32
VIT_05s0077g02140.t01	Wine grape	peroxisome	24.06	8.84
VIT_11s0016g03690.t01	Wine grape	peroxisome	23.31	8.56
VIT_19s0014g02370.t01	Wine grape	peroxisome	5.26	4.73

Protein Annotations

EntrezGene:100246523	wikigene:100246523	Gene3D:3.90.226.10	MapMan:35.1	EMBL:AM485603	ProteinID:CAN70976
ProteinID:CAN70976.1	ProteinID:CBI22871	ProteinID:CBI22871.3	InterPro:ClpP/crotonase-like_dom_sf	UniProt:D7SYK1	InterPro:Enoyl-CoA_hydra/iso
EMBL:FN595246	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005777	GO:GO:0008150	GO:GO:0008152	EntrezGene:LOC100246523	wikigene:LOC100246523
PFAM:PF00378	PANTHER:PTHR43802	SUPFAM:SSF52096	TIGR:TC52762	UniParc:UPI00019832CE	ArrayExpress:VIT_05s0077g00860
EnsemblPlantsGene:VIT_05s0077g00860	EnsemblPlants:VIT_05s0077g00860.t01	unigene:Vvi.3073	RefSeq:XP_002278726	RefSeq:XP_002278726.1	:

Description

No Description!

Coordinates

chr5:-:668054..671136

Molecular Weight (calculated)

29132.5 Da

IEP (calculated)

9.465

GRAVY (calculated)

-0.032

Length

266 amino acids

Sequence
(BLAST)

001: MAPSSSSEGL ILVNREPSGI AFVTINRPQL LNSLTRPMMV DLARAFKSLD ADDLVRVIVI TGSGRAFCSG VDLTAAEEVF KGDVKDVEID PVVQMERCRK
101: PIVGAIGGFA VTAGFEIALA CDILVAVKGT KFIDTHARFG IFPSWGLSQK LSRIIGANRA REVSLTAMPV TAEQAERWGF VNHVVEGSEL LKKAREVAEA
201: IIKNNQDLVM RYKSVINDGL KLDLGHALAL EKERAHNYYN GMTKEQFKKM QEFIAGRSSK KPSPKL

Best Arabidopsis Sequence Match ( AT4G16210.1 )
(BLAST)

001: MDQTVSENLI QVKKESGGIA VITINRPKSL NSLTRAMMVD LAKAFKDMDS DESVQVVIFT GSGRSFCSGV DLTAAESVFK GDVKDPETDP VVQMERLRKP
101: IIGAINGFAI TAGFELALAC DILVASRGAK FMDTHARFGI FPSWGLSQKL SRIIGANKAR EVSLTSMPLT ADVAGKLGFV NHVVEEGEAL KKAREIAEAI
201: IKNEQGMVLR IKSVINDGLK LDLGHALTLE KERAHAYYSG MTKEQFRKMQ EFIAGRGSKK PSSKL

Arabidopsis Description

ECHIAProbable enoyl-CoA hydratase 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q6NL24]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.