Subcellular Localization
min:
: max
Winner_takes_all: mitochondrion, peroxisome, cytosol
Predictor Summary:
Predictor Summary:
- cytosol 2
- peroxisome 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDX90535 | Canola | peroxisome | 99.61 | 99.61 |
| Bra012731.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 98.84 | 98.84 |
| AT4G16210.1 | Thale cress | peroxisome | 94.98 | 92.83 |
| KRH50717 | Soybean | mitochondrion, peroxisome | 37.07 | 82.76 |
| VIT_05s0077g00860.t01 | Wine grape | peroxisome, plastid | 77.22 | 75.19 |
| KRH02364 | Soybean | peroxisome | 76.83 | 75.09 |
| PGSC0003DMT400003039 | Potato | cytosol | 71.04 | 69.43 |
| Solyc01g059830.2.1 | Tomato | nucleus, plastid | 70.27 | 68.68 |
| GSMUA_Achr8P10700_001 | Banana | mitochondrion, peroxisome, plastid | 69.5 | 68.18 |
| GSMUA_Achr11P... | Banana | mitochondrion, peroxisome, plasma membrane | 68.34 | 67.3 |
| KRH50718 | Soybean | plastid | 41.7 | 65.06 |
| Os03t0310400-01 | Rice | extracellular, nucleus, plasma membrane | 67.18 | 64.93 |
| EER94969 | Sorghum | peroxisome, plastid | 64.86 | 62.69 |
| Zm00001d028909_P001 | Maize | extracellular, mitochondrion | 64.48 | 62.08 |
| HORVU4Hr1G053180.1 | Barley | peroxisome | 64.09 | 61.94 |
| TraesCS4B01G182600.1 | Wheat | peroxisome | 62.93 | 60.82 |
| TraesCS4D01G183100.1 | Wheat | peroxisome | 62.55 | 60.45 |
| TraesCS4A01G122800.1 | Wheat | peroxisome | 62.16 | 60.07 |
| CDY32958 | Canola | peroxisome | 24.32 | 22.83 |
| CDY67750 | Canola | mitochondrion | 26.25 | 22.59 |
| CDY43605 | Canola | peroxisome | 23.94 | 22.46 |
| CDY47214 | Canola | cytosol, mitochondrion, peroxisome | 28.19 | 22.12 |
| CDY53045 | Canola | cytosol, mitochondrion, peroxisome | 28.19 | 21.6 |
| CDY34924 | Canola | peroxisome | 25.1 | 8.94 |
| CDY05296 | Canola | peroxisome | 24.71 | 8.83 |
| CDY66477 | Canola | peroxisome | 24.32 | 8.74 |
| CDX97462 | Canola | peroxisome | 24.32 | 8.74 |
| CDY35240 | Canola | peroxisome | 24.32 | 8.73 |
| CDY06852 | Canola | peroxisome | 24.32 | 8.73 |
| CDY08028 | Canola | peroxisome | 24.32 | 8.68 |
| CDY24662 | Canola | peroxisome | 24.32 | 8.68 |
| CDX74076 | Canola | peroxisome | 23.94 | 8.54 |
| CDX92908 | Canola | peroxisome | 23.17 | 7.62 |
| CDY69211 | Canola | mitochondrion, peroxisome | 13.9 | 5.9 |
| CDX97647 | Canola | peroxisome | 4.25 | 3.49 |
| CDX98542 | Canola | peroxisome | 3.86 | 3.45 |
Protein Annotations
| EnsemblPlants:CDY09705 | EnsemblPlantsGene:GSBRNA2T00031376001 | Gene3D:3.90.226.10 | GO:A0A078F5H8 | GO:GO:0003674 | GO:GO:0003824 |
| GO:GO:0008150 | GO:GO:0008152 | InterPro:ClpP/crotonase-like_dom_sf | InterPro:Enoyl-CoA_hydra/iso | PANTHER:PTHR43802 | PFAM:PF00378 |
| ProteinID:CDY09705 | ProteinID:CDY09705.1 | SUPFAM:SSF52096 | UniParc:UPI0004EE2631 | UniProt:A0A078F5H8 | MapMan:35.1 |
Description
BnaC07g33560DBnaC07g33560D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F5H8]
Coordinates
chrLK031998:+:531708..533012
Molecular Weight (calculated)
28129.4 Da
IEP (calculated)
9.682
GRAVY (calculated)
-0.046
Length
259 amino acids
Sequence
(BLAST)
(BLAST)
001: MDLIQVNKES GGIGIITINR PKSLNSLTRA MMVDLARAFK EMDADESIQV VIFTGAGKSF CSGVDLTAAE SVFKGDVKDP ETDPVIQMER LRKPIIGAIN
101: GFAITAGFEL ALACDILVAS RGAKFMDTHA RFGIFPSWGL SQKLSRIIGA NKAREVSLTS MPLTADVAEK LGFVNHVVEE GEALKKARGI AEAIIKNEQG
201: MVLRIKSVIN DGLKLDLGHA LTLEKERAHA YYSGMTKEQF KKMQEFIAGR GSKKPSSKL
101: GFAITAGFEL ALACDILVAS RGAKFMDTHA RFGIFPSWGL SQKLSRIIGA NKAREVSLTS MPLTADVAEK LGFVNHVVEE GEALKKARGI AEAIIKNEQG
201: MVLRIKSVIN DGLKLDLGHA LTLEKERAHA YYSGMTKEQF KKMQEFIAGR GSKKPSSKL
001: MDQTVSENLI QVKKESGGIA VITINRPKSL NSLTRAMMVD LAKAFKDMDS DESVQVVIFT GSGRSFCSGV DLTAAESVFK GDVKDPETDP VVQMERLRKP
101: IIGAINGFAI TAGFELALAC DILVASRGAK FMDTHARFGI FPSWGLSQKL SRIIGANKAR EVSLTSMPLT ADVAGKLGFV NHVVEEGEAL KKAREIAEAI
201: IKNEQGMVLR IKSVINDGLK LDLGHALTLE KERAHAYYSG MTKEQFRKMQ EFIAGRGSKK PSSKL
101: IIGAINGFAI TAGFELALAC DILVASRGAK FMDTHARFGI FPSWGLSQKL SRIIGANKAR EVSLTSMPLT ADVAGKLGFV NHVVEEGEAL KKAREIAEAI
201: IKNEQGMVLR IKSVINDGLK LDLGHALTLE KERAHAYYSG MTKEQFRKMQ EFIAGRGSKK PSSKL
Arabidopsis Description
ECHIAProbable enoyl-CoA hydratase 1, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q6NL24]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.