Subcellular Localization
min:
: max
Winner_takes_all: peroxisome
Predictor Summary:
Predictor Summary:
- nucleus 1
- peroxisome 6
- cytosol 1
Predictors | GFP | MS/MS | Papers |
---|---|---|---|
PPI
Inferred distinct locusB in Crop
locusB | locations |
---|---|
Bra005522.1-P | |
Bra021829.1-P | |
Bra022927.1-P |
Inferred from Arabidopsis experimental PPI
Ath locusA | locusB | Ath locusB | Paper |
---|---|---|---|
AT5G43280.1 | Bra005522.1-P | AT2G33150.1 | 24879895 |
AT5G43280.1 | Bra021829.1-P | AT2G33150.1 | 24879895 |
AT5G43280.1 | Bra022927.1-P | AT2G33150.1 | 24879895 |
Homology
Paralog
locus | Identity | Homology Identity |
---|
Ortholog
locus | Homology Species | Location | Identity | Homology Identity |
---|---|---|---|---|
CDY32958 | Canola | peroxisome | 98.91 | 98.91 |
AT5G43280.1 | Thale cress | peroxisome | 88.41 | 87.77 |
VIT_01s0146g00270.t01 | Wine grape | peroxisome | 72.1 | 72.36 |
KRH66641 | Soybean | peroxisome | 65.58 | 66.3 |
Solyc05g024240.2.1 | Tomato | nucleus | 52.9 | 62.93 |
TraesCS3D01G430400.2 | Wheat | peroxisome | 59.06 | 56.21 |
TraesCS3D01G430300.1 | Wheat | peroxisome | 59.06 | 56.21 |
TraesCS3B01G472000.1 | Wheat | peroxisome | 59.06 | 56.21 |
TraesCS3A01G438000.1 | Wheat | peroxisome | 59.06 | 56.21 |
TraesCS3A01G438100.1 | Wheat | peroxisome | 57.61 | 54.83 |
Os01t0925200-01 | Rice | nucleus, plasma membrane | 57.25 | 54.3 |
Zm00001d011971_P001 | Maize | mitochondrion, peroxisome | 56.52 | 54.17 |
KXG34022 | Sorghum | peroxisome | 56.88 | 53.4 |
GSMUA_Achr7P22470_001 | Banana | peroxisome | 55.43 | 52.94 |
Bra012731.1-P | Field mustard | cytosol, peroxisome, plasma membrane | 23.19 | 24.71 |
Bra027150.1-P | Field mustard | cytosol, mitochondrion, peroxisome | 25.36 | 20.71 |
Bra029608.1-P | Field mustard | peroxisome | 25.36 | 9.66 |
Bra040296.1-P | Field mustard | peroxisome | 24.28 | 9.24 |
Bra001221.1-P | Field mustard | peroxisome | 24.28 | 9.24 |
Bra021079.1-P | Field mustard | nucleus | 25.72 | 9.14 |
Bra011076.1-P | Field mustard | peroxisome | 22.83 | 8.73 |
Bra010347.1-P | Field mustard | peroxisome | 22.1 | 8.31 |
Bra024170.1-P | Field mustard | peroxisome | 21.74 | 8.14 |
Bra027263.1-P | Field mustard | peroxisome | 2.9 | 2.72 |
Protein Annotations
Gene3D:1.10.12.10 | Gene3D:3.90.226.10 | MapMan:5.7.3.5.2 | EnsemblPlantsGene:Bra027479 | EnsemblPlants:Bra027479.1 | EnsemblPlants:Bra027479.1-P |
InterPro:ClpP/crotonase-like_dom_sf | InterPro:Enoyl-CoA_hyd/isom_CS | InterPro:Enoyl-CoA_hydra/iso | InterPro:Enoyl-CoA_hydra_C | GO:GO:0003674 | GO:GO:0003824 |
GO:GO:0005575 | GO:GO:0005622 | GO:GO:0005623 | GO:GO:0005737 | GO:GO:0005777 | GO:GO:0008150 |
GO:GO:0008152 | GO:GO:0051750 | InterPro:IPR014748 | UniProt:M4EFB7 | PFAM:PF00378 | ScanProsite:PS00166 |
PANTHER:PTHR43149 | PANTHER:PTHR43149:SF1 | SUPFAM:SSF52096 | UniParc:UPI0002542853 | SEG:seg | : |
Description
AT5G43280 (E=4e-119) ATDCI1, DCI1 | ATDCI1 (DELTA(3,5),DELTA(2,4)-DIENOYL-COA ISOMERASE 1); delta3,5-delta2,4-dienoyl-CoA isomerase/ enoyl-CoA hydratase
Coordinates
chrA09:-:13999786..14000770
Molecular Weight (calculated)
29675.8 Da
IEP (calculated)
7.463
GRAVY (calculated)
0.021
Length
276 amino acids
Sequence
(BLAST)
(BLAST)
001: MESYKTLEIV RKNTDSSVFH LILNRPSQLN ALSLDFFDEL PEALSSLDQN PDVSVIILSG AGKHFCSGID LASLSSISAQ ASSGGDRGRS SEGLRRRIKS
101: MQAAITAVEE CRKPVIAAVH GACIGGGVDL VTACDVRYCS EEAFFSIKEV DLAIVADLGT LQRLPRIVGH AKAMELALTA RRFSGSEAKD LGLVSHVFGS
201: KSELDKGVTM IAERIAAKSP LAVTGTKAVL LRSREMSVEQ GLDYVATWNS GMLISNDLNE AVSAQMMKRQ PRFSKL
101: MQAAITAVEE CRKPVIAAVH GACIGGGVDL VTACDVRYCS EEAFFSIKEV DLAIVADLGT LQRLPRIVGH AKAMELALTA RRFSGSEAKD LGLVSHVFGS
201: KSELDKGVTM IAERIAAKSP LAVTGTKAVL LRSREMSVEQ GLDYVATWNS GMLISNDLNE AVSAQMMKRQ PRFSKL
001: MTMESYKTLE IIRKNTDSSV FHLIINRPSH LNALSLDFFI EFPKALSSLD QNPDVSVIIL SGAGKHFCSG IDLNSLSSIS TQSSSGNDRG RSSEQLRRKI
101: KSMQAAITAI EQCRKPVIAA IHGACIGGGV DLITACDIRY CSEDAFFSIK EVDLAIVADL GTLQRLPSIV GYANAMELAL TARRFSGSEA KDLGLVSKVF
201: GSKSELDNGV TTIAEGIGGK SPLAVTGTKA VLLRSREVSV EQGLDYVATW NSAMLISDDL NEAVSAQMMK RKPRFAKL
101: KSMQAAITAI EQCRKPVIAA IHGACIGGGV DLITACDIRY CSEDAFFSIK EVDLAIVADL GTLQRLPSIV GYANAMELAL TARRFSGSEA KDLGLVSKVF
201: GSKSELDNGV TTIAEGIGGK SPLAVTGTKA VLLRSREVSV EQGLDYVATW NSAMLISDDL NEAVSAQMMK RKPRFAKL
Arabidopsis Description
DCI1Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q9FHR8]
SUBAcon: [peroxisome]
SUBAcon: [peroxisome]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.