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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: peroxisome

Predictor Summary:
  • nucleus 1
  • peroxisome 6
  • cytosol 1
PPI

Inferred distinct locusB in Crop

Inferred from Arabidopsis experimental PPI

Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
CDY32958 Canola peroxisome 98.91 98.91
AT5G43280.1 Thale cress peroxisome 88.41 87.77
VIT_01s0146g00270.t01 Wine grape peroxisome 72.1 72.36
KRH66641 Soybean peroxisome 65.58 66.3
Solyc05g024240.2.1 Tomato nucleus 52.9 62.93
TraesCS3D01G430400.2 Wheat peroxisome 59.06 56.21
TraesCS3D01G430300.1 Wheat peroxisome 59.06 56.21
TraesCS3B01G472000.1 Wheat peroxisome 59.06 56.21
TraesCS3A01G438000.1 Wheat peroxisome 59.06 56.21
TraesCS3A01G438100.1 Wheat peroxisome 57.61 54.83
Os01t0925200-01 Rice nucleus, plasma membrane 57.25 54.3
Zm00001d011971_P001 Maize mitochondrion, peroxisome 56.52 54.17
KXG34022 Sorghum peroxisome 56.88 53.4
GSMUA_Achr7P22470_001 Banana peroxisome 55.43 52.94
Bra012731.1-P Field mustard cytosol, peroxisome, plasma membrane 23.19 24.71
Bra027150.1-P Field mustard cytosol, mitochondrion, peroxisome 25.36 20.71
Bra029608.1-P Field mustard peroxisome 25.36 9.66
Bra040296.1-P Field mustard peroxisome 24.28 9.24
Bra001221.1-P Field mustard peroxisome 24.28 9.24
Bra021079.1-P Field mustard nucleus 25.72 9.14
Bra011076.1-P Field mustard peroxisome 22.83 8.73
Bra010347.1-P Field mustard peroxisome 22.1 8.31
Bra024170.1-P Field mustard peroxisome 21.74 8.14
Bra027263.1-P Field mustard peroxisome 2.9 2.72
Protein Annotations
Gene3D:1.10.12.10Gene3D:3.90.226.10MapMan:5.7.3.5.2EnsemblPlantsGene:Bra027479EnsemblPlants:Bra027479.1EnsemblPlants:Bra027479.1-P
InterPro:ClpP/crotonase-like_dom_sfInterPro:Enoyl-CoA_hyd/isom_CSInterPro:Enoyl-CoA_hydra/isoInterPro:Enoyl-CoA_hydra_CGO:GO:0003674GO:GO:0003824
GO:GO:0005575GO:GO:0005622GO:GO:0005623GO:GO:0005737GO:GO:0005777GO:GO:0008150
GO:GO:0008152GO:GO:0051750InterPro:IPR014748UniProt:M4EFB7PFAM:PF00378ScanProsite:PS00166
PANTHER:PTHR43149PANTHER:PTHR43149:SF1SUPFAM:SSF52096UniParc:UPI0002542853SEG:seg:
Description
AT5G43280 (E=4e-119) ATDCI1, DCI1 | ATDCI1 (DELTA(3,5),DELTA(2,4)-DIENOYL-COA ISOMERASE 1); delta3,5-delta2,4-dienoyl-CoA isomerase/ enoyl-CoA hydratase
Coordinates
chrA09:-:13999786..14000770
Molecular Weight (calculated)
29675.8 Da
IEP (calculated)
7.463
GRAVY (calculated)
0.021
Length
276 amino acids
Sequence
(BLAST)
001: MESYKTLEIV RKNTDSSVFH LILNRPSQLN ALSLDFFDEL PEALSSLDQN PDVSVIILSG AGKHFCSGID LASLSSISAQ ASSGGDRGRS SEGLRRRIKS
101: MQAAITAVEE CRKPVIAAVH GACIGGGVDL VTACDVRYCS EEAFFSIKEV DLAIVADLGT LQRLPRIVGH AKAMELALTA RRFSGSEAKD LGLVSHVFGS
201: KSELDKGVTM IAERIAAKSP LAVTGTKAVL LRSREMSVEQ GLDYVATWNS GMLISNDLNE AVSAQMMKRQ PRFSKL
Best Arabidopsis Sequence Match ( AT5G43280.1 )
(BLAST)
001: MTMESYKTLE IIRKNTDSSV FHLIINRPSH LNALSLDFFI EFPKALSSLD QNPDVSVIIL SGAGKHFCSG IDLNSLSSIS TQSSSGNDRG RSSEQLRRKI
101: KSMQAAITAI EQCRKPVIAA IHGACIGGGV DLITACDIRY CSEDAFFSIK EVDLAIVADL GTLQRLPSIV GYANAMELAL TARRFSGSEA KDLGLVSKVF
201: GSKSELDNGV TTIAEGIGGK SPLAVTGTKA VLLRSREVSV EQGLDYVATW NSAMLISDDL NEAVSAQMMK RKPRFAKL
Arabidopsis Description
DCI1Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase, peroxisomal [Source:UniProtKB/Swiss-Prot;Acc:Q9FHR8]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.