Factsheet for Bra005522.1-P

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
peroxisome 3
cytosol 2
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Bra002826.1-P
Bra028938.1-P
Bra035613.1-P

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT2G33150.1	Bra002826.1-P	AT5G56290.1	24879895
AT2G33150.1	Bra028938.1-P	AT5G56290.1	24879895
AT2G33150.1	Bra035613.1-P	AT5G56290.1	24879895

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY17140	Canola	cytosol	100.0	100.0
Bra022927.1-P	Field mustard	cytosol	97.19	97.61
AT2G33150.1	Thale cress	cytosol	96.54	96.54
Bra021829.1-P	Field mustard	cytosol	96.1	96.1
VIT_05s0051g00720.t01	Wine grape	cytosol	86.15	86.33
Bra030586.1-P	Field mustard	mitochondrion	83.98	86.03
PGSC0003DMT400076175	Potato	cytosol	85.71	85.16
Solyc09g091470.2.1	Tomato	plastid	85.71	85.16
KRH33469	Soybean	endoplasmic reticulum, nucleus	84.42	84.23
KRG90241	Soybean	nucleus	83.77	83.95
Bra020673.1-P	Field mustard	cytosol	67.53	68.42
Bra020710.1-P	Field mustard	cytosol, plastid	29.65	33.99
Bra037501.1-P	Field mustard	mitochondrion, plastid	30.74	33.41
Bra036182.1-P	Field mustard	plastid	29.87	32.02
Bra017469.1-P	Field mustard	plastid	29.0	31.02
Bra022152.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	6.93	25.4

Protein Annotations

Gene3D:3.40.47.10	MapMan:5.7.3.2.3	EnsemblPlantsGene:Bra005522	EnsemblPlants:Bra005522.1	EnsemblPlants:Bra005522.1-P	GO:GO:0003674
GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
InterPro:IPR016039	UniProt:M4CMT4	PFAM:PF00108	PFAM:PF02803	ScanProsite:PS00098	ScanProsite:PS00099
ScanProsite:PS00737	PANTHER:PTHR43853	PANTHER:PTHR43853:SF4	SUPFAM:SSF53901	TIGRFAMs:TIGR01930	InterPro:Thiolase
InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N	InterPro:Thiolase_acyl_enz_int_AS
UniParc:UPI00025474E1	SEG:seg	:	:	:	:

Description

AT2G33150 (E=2e-228) PKT3, PED1, KAT2 | PKT3 (PEROXISOMAL 3-KETOACYL-COA THIOLASE 3); acetyl-CoA C-acyltransferase

Coordinates

chrA05:+:5996734..5999572

Molecular Weight (calculated)

48567.2 Da

IEP (calculated)

8.319

GRAVY (calculated)

-0.060

Length

462 amino acids

Sequence
(BLAST)

001: MEKAIERQRV LLEHLRPSSS SSHSFEGSLS ASACLAGDSA AYQRTSLYGD DVVIVAAHRT ALCKSKRGNF KDTYPDDLLA PVLRALIEKT NLNPSDVGDI
101: VVGTVLAPGS QRASECRMSA FYAGFPETVP VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTT NPMAWEGSVN PAVKKFEQAQ NCLLPMGVTS
201: ENVAQRFGVS RQDQDQAAVD SHRKAAAATA AGKFKDEIIP VKTKLVDPKT GDEKPITVSV DDGIRPTTTL ATLGKLKPVF KKDGTTTAGN SSQVSDGAGA
301: VLLMRRSVAT QKGLPVLGVF RTFAAVGVDP AIMGVGPAVA IPAAVKAAGL ELDDIDLFEI NEAFASQFVY CRNKLGLDAE KINVNGGAMA IGHPLGATGA
401: RCVATLLHEM KRRGKDCRFG VVSMCIGTGM GAAAVFERGD GVDELRNARK VESHGLLSKD AR

Best Arabidopsis Sequence Match ( AT2G33150.1 )
(BLAST)

001: MEKAIERQRV LLEHLRPSSS SSHNYEASLS ASACLAGDSA AYQRTSLYGD DVVIVAAHRT PLCKSKRGNF KDTYPDDLLA PVLRALIEKT NLNPSEVGDI
101: VVGTVLAPGS QRASECRMAA FYAGFPETVA VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTT NPMAWEGSVN PAVKKFAQAQ NCLLPMGVTS
201: ENVAQRFGVS RQEQDQAAVD SHRKAAAATA AGKFKDEIIP VKTKLVDPKT GDEKPITVSV DDGIRPTTTL ASLGKLKPVF KKDGTTTAGN SSQVSDGAGA
301: VLLMKRSVAM QKGLPVLGVF RTFAAVGVDP AIMGIGPAVA IPAAVKAAGL ELDDIDLFEI NEAFASQFVY CRNKLGLDPE KINVNGGAMA IGHPLGATGA
401: RCVATLLHEM KRRGKDCRFG VVSMCIGTGM GAAAVFERGD GVDELRNARK VEAQGLLSKD AR

Arabidopsis Description

PED1PKT3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.