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Field mustard
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Field mustard
Subcellular Localization
min:
: max

 
Winner_takes_all: mitochondrion, plastid, nucleus, cytosol

Predictor Summary:
  • nucleus 2
  • cytosol 2
  • plastid 3
  • peroxisome 1
  • mitochondrion 2
Predictors GFP MS/MS Papers
Winner Takes All:cytosol, mitochondrion, nucleus, plastid
Any Predictor:cytosol, mitochondrion, nucleus, peroxisome, plastid
BaCelLo:nucleus
EpiLoc:cytosol
iPSORT:plastid
MultiLoc:nucleus
Plant-mPloc:peroxisome, plastid
PProwler:mitochondrion
TargetP:mitochondrion
WoLF PSORT:cytosol
YLoc:plastid
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra017469.1-P Field mustard plastid 79.37 23.15
Bra020710.1-P Field mustard cytosol, plastid 65.08 20.35
Bra037501.1-P Field mustard mitochondrion, plastid 64.29 19.06
Bra036182.1-P Field mustard plastid 65.08 19.03
VIT_18s0089g00570.t01 Wine grape extracellular 15.87 14.49
Bra030586.1-P Field mustard mitochondrion 26.19 7.32
Bra021829.1-P Field mustard cytosol 26.19 7.14
Bra020673.1-P Field mustard cytosol 25.4 7.02
Bra022927.1-P Field mustard cytosol 25.4 6.96
Bra005522.1-P Field mustard cytosol 25.4 6.93
Protein Annotations
EnsemblPlants:Bra022152.1EnsemblPlants:Bra022152.1-PEnsemblPlantsGene:Bra022152Gene3D:3.40.47.10GO:GO:0003674GO:GO:0003824
GO:GO:0008150GO:GO:0008152InterPro:IPR016039InterPro:Thiolase-likePANTHER:PTHR18919PANTHER:PTHR18919:SF131
SEG:segUniParc:UPI000254630FUniProt:M4E055MapMan:35.1::
Description
AT5G47720 (E=6e-014) | acetyl-CoA C-acyltransferase, putative / 3-ketoacyl-CoA thiolase, putative
Coordinates
chrA02:+:19695152..19696007
Molecular Weight (calculated)
13393.1 Da
IEP (calculated)
9.511
GRAVY (calculated)
-0.360
Length
126 amino acids
Sequence
(BLAST)
001: MMLLWLGGMG SMSNVPKYLP DGSRGSRLGH DAVVDEVSSG RGKPSVLVDK DDGLGKLKKL RPSFKEDGGS VTAGNASSIS VSGEKAIELG LHVIAKIRGY
101: ADAAQAPELF TTMPETETRV YQTNRK
Best Arabidopsis Sequence Match ( AT5G47720.5 )
(BLAST)
001: MYLSFDPAVM ATYSSVPVCA DVCVVGVART PIGDFLGSLS SLTATRLGSI AIQAALKRAH VDPALVEEVF FGNVLTANLG QAPARQAALG AGIPYSVICT
101: TINKVCAAGM KSVMLASQSI QLGLNDIVVA GGMESMSNVP KYLPDARRGS RLGHDTVVDG MMKDGLWDVY NDFGMGVCGE ICADQYRITR EEQDAYAIQS
201: FERGIAAQNT QLFAWEIVPV EVSTGRGRPS VVIDKDEGLG KFDAAKLKKL RPSFKEDGGS VTAGNASSIS DGAAALVLVS GEKALELGLH VIAKIRGYAD
301: AAQAPELFTT TPALAIPKAI KRAGLDASQV DYYEINEAFS VVALANQKLL GLDPERLNAH GGAVSLGHPL GCSGARILVT LLGVLRAKKG KYGVASICNG
401: GGGASALVLE FM
Arabidopsis Description
Probable acetyl-CoA acetyltransferase, cytosolic 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK7]
SUBAcon: [peroxisome]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.