Factsheet for VIT_18s0089g00570.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
peroxisome 2
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	peroxisome, plastid, secretory
BaCelLo:	secretory
EpiLoc:	peroxisome
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	peroxisome
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_00s0531g00050.t01	Wine grape	peroxisome	54.35	17.05
Bra022152.1-P	Field mustard	cytosol, mitochondrion, nucleus, plastid	14.49	15.87
VIT_12s0057g01200.t01	Wine grape	cytosol	44.2	14.7
VIT_05s0051g00720.t01	Wine grape	cytosol	18.12	5.42
VIT_07s0005g05610.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	16.67	5.19

Protein Annotations

Gene3D:3.40.47.10	MapMan:35.1	ProteinID:CBI17010	ProteinID:CBI17010.3	UniProt:D7SMY1	EMBL:FN594956
GO:GO:0003674	GO:GO:0003824	GO:GO:0003985	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623
GO:GO:0005737	GO:GO:0005829	GO:GO:0006629	GO:GO:0006635	GO:GO:0008150	GO:GO:0008152
GO:GO:0009056	GO:GO:0009987	GO:GO:0016620	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747
GO:GO:0055114	InterPro:IPR016039	PFAM:PF00108	PANTHER:PTHR18919	PANTHER:PTHR18919:SF131	SUPFAM:SSF53901
SignalP:SignalP-noTM	TMHMM:TMhelix	InterPro:Thiolase-like	InterPro:Thiolase_N	UniParc:UPI0001BE0D56	ArrayExpress:VIT_18s0089g00570
EnsemblPlantsGene:VIT_18s0089g00570	EnsemblPlants:VIT_18s0089g00570.t01	:	:	:	:

Description

No Description!

Coordinates

chr18:-:28357963..28360311

Molecular Weight (calculated)

14976.3 Da

IEP (calculated)

7.036

GRAVY (calculated)

0.101

Length

138 amino acids

Sequence
(BLAST)

001: MCGCGGFIVS GCLLLGLICF VLGANTAQLH CTTLLPCLRP NHREPQIPAP AHHYLRGLRV CKNDVVVAGG MERMSNAPKY LVDATNGSRL GHDTIVDGMA
101: KDGLWDVYND FGMAICAEIC ADQHKITREQ QVTYCLQG

Best Arabidopsis Sequence Match ( AT5G47720.2 )
(BLAST)

001: MAPPVSDDSL QPRDVCVVGV ARTPIGDFLG SLSSLTATRL GSIAIQAALK RAHVDPALVE EVFFGNVLTA NLGQAPARQA ALGAGIPYSV ICTTINKVCA
101: AGMKSVMLAS QSIQLGLNDI VVAGGMESMS NVPKYLPDAR RGSRLGHDTV VDGMMKDGLW DVYNDFGMGV CGEICADQYR ITREEQDAYA IQSFERGIAA
201: QNTQLFAWEI VPVEVSTGRG RPSVVIDKDE GLGKFDAAKL KKLRPSFKED GGSVTAGNAS SISDGAAALV LVSGEKALEL GLHVIAKIRG YADAAQAPEL
301: FTTTPALAIP KAIKRAGLDA SQVDYYEINE AFSVVALANQ KLLGLDPERL NAHGGAVSLG HPLGCSGARI LVTLLGVLRA KKGKYGVASI CNGGGGASAL
401: VLEFMSEKTI GYSAL

Arabidopsis Description

Probable acetyl-CoA acetyltransferase, cytosolic 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK7]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.