Factsheet for VIT_07s0005g05610.t01

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion, peroxisome, plastid, cytosol

Predictor Summary:

plastid 2
peroxisome 3
mitochondrion 2
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH49796	Soybean	endoplasmic reticulum	78.1	77.75
KRG89223	Soybean	mitochondrion	76.98	76.63
Solyc09g061840.2.1	Tomato	cytosol	77.65	75.44
PGSC0003DMT400040876	Potato	cytosol	77.43	75.22
GSMUA_Achr8P12850_001	Banana	cytosol	77.88	75.16
VIT_05s0051g00720.t01	Wine grape	cytosol	76.75	73.75
GSMUA_Achr11P...	Banana	cytosol	74.94	72.33
EER94131	Sorghum	mitochondrion	75.39	72.29
Zm00001d014093_P002	Maize	mitochondrion	75.17	72.23
Os10t0457600-01	Rice	golgi, plasma membrane	74.49	71.58
TraesCS1D01G142700.1	Wheat	mitochondrion	74.49	71.58
TraesCS1A01G143900.2	Wheat	mitochondrion	74.49	71.58
TraesCS1B01G161300.1	Wheat	golgi	74.04	71.15
CDY33940	Canola	cytosol	72.91	70.83
Bra020673.1-P	Field mustard	cytosol	72.91	70.83
HORVU1Hr1G038330.1	Barley	cytosol	74.04	70.69
AT5G48880.2	Thale cress	mitochondrion	71.78	69.58
CDY05657	Canola	cytosol	72.23	69.26
VIT_12s0057g01200.t01	Wine grape	cytosol	30.47	32.53
VIT_00s0531g00050.t01	Wine grape	peroxisome	29.57	29.77
VIT_18s0089g00570.t01	Wine grape	extracellular	5.19	16.67

Protein Annotations

EntrezGene:100245940	wikigene:100245940	Gene3D:3.40.47.10	MapMan:5.7.3.2.3	ProteinID:CBI37268	ProteinID:CBI37268.3
UniProt:D7U3F1	EMBL:FN596502	GO:GO:0003674	GO:GO:0003824	GO:GO:0005575	GO:GO:0005622
GO:GO:0005623	GO:GO:0005737	GO:GO:0005777	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	EntrezGene:LOC100245940	wikigene:LOC100245940	PFAM:PF00108
PFAM:PF02803	PIRSF:PIRSF000429	ScanProsite:PS00098	ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR43853
PANTHER:PTHR43853:SF4	SUPFAM:SSF53901	TIGR:TC53311	TIGR:TC61434	TIGRFAMs:TIGR01930	InterPro:Thiolase
InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N	InterPro:Thiolase_acyl_enz_int_AS
UniParc:UPI0001BE4A4B	ArrayExpress:VIT_07s0005g05610	EnsemblPlantsGene:VIT_07s0005g05610	EnsemblPlants:VIT_07s0005g05610.t01	unigene:Vvi.19217	unigene:Vvi.5310
RefSeq:XP_003632434	RefSeq:XP_003632434.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr7:+:9767748..9773634

Molecular Weight (calculated)

46295.0 Da

IEP (calculated)

8.333

GRAVY (calculated)

0.054

Length

443 amino acids

Sequence
(BLAST)

001: MEKAINRQRV LLEHLRPSSS SPSPSPINES SLSASICLAG NRATNPVDSG DDIVVVAACR TAICKAKRGG FKDTLPDDIL APVLKALIEK TNVDPSEVGD
101: IVVGTVLAPG SQRAIECRMA AFYAGFPDTV PIRTVNRQCS SGLQAVVDVV AAIRAGLYDI GIGAGLESMT TDNIAGVTTV NPKVDIFAQA RDCLLPMGLT
201: SENVAKRYGV TRQEQDQAAV ESHRRAAAAS AAGKFKEEII PVSTKIVDPK TGEVKPVIIS VDDGIRPDTN MKSLAKLKPA FAKDGSTTAG NASQVSDGAG
301: GALLMKRSLA MKRGLPILGL FRSYAAVGVE PGVMGVGPAV AIPIAAKNAG LEVADIDLFE INEAFASQYV YCCKKLDLDP KKVNVNGGAL ALGHPLGATG
401: ARCVSTLLYE MKRRGKDCRY GVISMCIGSG MGAAAVFERG DSY

Best Arabidopsis Sequence Match ( AT2G33150.1 )
(BLAST)

001: MEKAIERQRV LLEHLRPSSS SSHNYEASLS ASACLAGDSA AYQRTSLYGD DVVIVAAHRT PLCKSKRGNF KDTYPDDLLA PVLRALIEKT NLNPSEVGDI
101: VVGTVLAPGS QRASECRMAA FYAGFPETVA VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTT NPMAWEGSVN PAVKKFAQAQ NCLLPMGVTS
201: ENVAQRFGVS RQEQDQAAVD SHRKAAAATA AGKFKDEIIP VKTKLVDPKT GDEKPITVSV DDGIRPTTTL ASLGKLKPVF KKDGTTTAGN SSQVSDGAGA
301: VLLMKRSVAM QKGLPVLGVF RTFAAVGVDP AIMGIGPAVA IPAAVKAAGL ELDDIDLFEI NEAFASQFVY CRNKLGLDPE KINVNGGAMA IGHPLGATGA
401: RCVATLLHEM KRRGKDCRFG VVSMCIGTGM GAAAVFERGD GVDELRNARK VEAQGLLSKD AR

Arabidopsis Description

PED1PKT3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.