Factsheet for VIT_00s0531g00050.t01

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 2
peroxisome 5
plastid 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH01946	Soybean	nucleus	76.36	82.15
KRH51203	Soybean	cytosol, mitochondrion, peroxisome	76.36	82.15
VIT_12s0057g01200.t01	Wine grape	cytosol	77.27	81.93
PGSC0003DMT400050843	Potato	cytosol, peroxisome, plastid	73.64	78.83
AT5G47720.4	Thale cress	cytosol, peroxisome, plastid	74.32	78.8
Solyc04g015100.2.1	Tomato	cytosol, peroxisome, plastid	73.41	78.59
CDY25950	Canola	cytosol	73.64	78.07
CDY41065	Canola	cytosol, peroxisome, plastid	73.18	77.59
Bra017469.1-P	Field mustard	plastid	72.73	74.07
VIT_18s0089g00570.t01	Wine grape	extracellular	17.05	54.35
VIT_07s0005g05610.t01	Wine grape	cytosol, mitochondrion, peroxisome, plastid	29.77	29.57
VIT_05s0051g00720.t01	Wine grape	cytosol	30.0	28.63

Protein Annotations

EntrezGene:100855181	wikigene:100855181	Gene3D:3.40.47.10	MapMan:9.1.1.1	ProteinID:CCB57429	ProteinID:CCB57429.1
ncoils:Coil	UniProt:F6HRX1	EMBL:FN596056	GO:GO:0003674	GO:GO:0003824	GO:GO:0003985
GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006629
GO:GO:0006635	GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	EntrezGene:LOC100855181	wikigene:LOC100855181	PFAM:PF00108
PFAM:PF02803	PIRSF:PIRSF000429	ScanProsite:PS00098	ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR18919
PANTHER:PTHR18919:SF131	SUPFAM:SSF53901	TIGR:TC54324	TIGR:TC55738	TIGR:TC56656	TIGRFAMs:TIGR01930
InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N
InterPro:Thiolase_acyl_enz_int_AS	UniParc:UPI00021085A9	ArrayExpress:VIT_00s0531g00050	EnsemblPlantsGene:VIT_00s0531g00050	EnsemblPlants:VIT_00s0531g00050.t01	unigene:Vvi.7759
RefSeq:XP_003635396	RefSeq:XP_003635396.1	SEG:seg	:	:	:

Description

No Description!

Coordinates

chrUn:+:31407648..31413510

Molecular Weight (calculated)

45961.7 Da

IEP (calculated)

8.388

GRAVY (calculated)

0.187

Length

440 amino acids

Sequence
(BLAST)

001: MHTPLFISPD PHPHTRSSLC RFLPWLLMIQ SNLEFSLGTD VCIVGVARTP MGGFLGFLSS LSATKLGSIA IRGALRRANI DPSLVQEVFF GNVLSANLGQ
101: APARQAALGA GIPNSVVCTT INKVCASGMK AIMFAAQSIQ LGVNDVVVAG GMESMSNAPK YLVYARNGSR LGHDTIVDGM IKDGLWDVYN DFGMGICAEI
201: CADQHTITRE EQDSYSIQSF ERGISAQNNG AFAWEIIPVE VSGGRGKPST LVDKDEGLGK FDAAKLRKLR PSFKDGGSVT AGNASSISDG AAALVLVSGK
301: KAVELRLQVI AKIAGYGDAA QAPELFTTTP ALAIPKAISN AGLKASQIDY YEINEAFAVV ALANQKLLGL DPEKVNVHGG AVSLGHPIGC SGARILVTLL
401: GILRQKNGKY GVGGICNGGG GASALVLELM PVARLGHSKL

Best Arabidopsis Sequence Match ( AT5G47720.4 )
(BLAST)

001: MAPPVSDDSL QPRDVCVVGV ARTPIGDFLG SLSSLTATRL GSIAIQAALK RAHVDPALVE EVFFGNVLTA NLGQAPARQA ALGAGIPYSV ICTTINKVCA
101: AGMKSVMLAS QSIQLGLNDI VVAGGMESMS NVPKYLPDAR RGSRLGHDTV VDGMMKDGLW DVYNDFGMGV CGEICADQYR ITREEQDAYA IQSFERGIAA
201: QNTQLFAWEI VPVEVSTGRG RPSVVIDKDE GLGKFDAAKL KKLRPSFKED GGSVTAGNAS SISDGAAALV LVSGEKALEL GLHVIAKIRG YADAAQAPEL
301: FTTTPALAIP KAIKRAGLDA SQVDYYEINE AFSVVALANQ KLLGLDPERL NAHGGAVSLG HPLGCSGARI LVTLLGVLRA KKGKYGVASI CNGGGGASAL
401: VLEFMSEKTI GYSAL

Arabidopsis Description

Probable acetyl-CoA acetyltransferase, cytosolic 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK7]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.