Factsheet for Solyc04g015100.2.1

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
peroxisome 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400050843	Potato	cytosol, peroxisome, plastid	99.27	99.27
KRH01946	Soybean	nucleus	79.32	79.71
KRH51203	Soybean	cytosol, mitochondrion, peroxisome	79.08	79.46
Solyc07g045350.2.1	Tomato	extracellular, plastid, unclear	76.89	78.22
AT5G47720.4	Thale cress	cytosol, peroxisome, plastid	78.83	78.07
CDY25950	Canola	cytosol	77.62	76.87
CDY41065	Canola	cytosol, peroxisome, plastid	77.62	76.87
Solyc05g017760.2.1	Tomato	plastid, unclear	75.18	75.92
VIT_00s0531g00050.t01	Wine grape	peroxisome	78.59	73.41
Bra017469.1-P	Field mustard	plastid	76.89	73.15
Solyc09g061840.2.1	Tomato	cytosol	33.58	30.26
Solyc09g091470.2.1	Tomato	plastid	34.06	30.11

Protein Annotations

Gene3D:3.40.47.10	MapMan:9.1.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0003985	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006629	GO:GO:0006635
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016740	GO:GO:0016746
GO:GO:0016747	InterPro:IPR016039	UniProt:K4BQ13	PFAM:PF00108	PFAM:PF02803	PIRSF:PIRSF000429
ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR18919	PANTHER:PTHR18919:SF131	SUPFAM:SSF53901	EnsemblPlantsGene:Solyc04g015100.2
EnsemblPlants:Solyc04g015100.2.1	TIGRFAMs:TIGR01930	InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C
InterPro:Thiolase_CS	InterPro:Thiolase_N	UniParc:UPI00027667FF	SEG:seg	:	:

Description

No Description!

Coordinates

chr4:+:5276509..5281855

Molecular Weight (calculated)

42573.5 Da

IEP (calculated)

8.651

GRAVY (calculated)

0.171

Length

411 amino acids

Sequence
(BLAST)

001: MVQDSIKPQD VCIVGVARTP MGGFLGSLSS LSATELGSAA IRAALKRANV DPSLVQEVFF GNVLSANLGQ APARQAALGA GIPYSVICTT INKVCSSGLK
101: ATMIAAQTIQ SGANDIVVTG GMESMSNVPK YLAQARKGSR LGHDTVVDGM LKDGLWDVYN DFGMGVCAEL CADQYKITRE EQDSYAIQSF ERGIAAQRSG
201: AFAWEIVPVE ISGGRGRPSS IVDKDEGLIK FDASKLRKLR PSFKENGGSV TAGNASIISD GAAALVLVSG KKAIELGLQV IGRIRGFADA AQAPELFPTA
301: PALAIPKAIK NSGLESSQID YYEINEAFSV VALANQRLLN LNSGKLNAHG GAVSLGHPLG CSGARILVTL LGVLKQKNAK FGVAGVCNGG GGASALVVEF
401: MPVGMVARSS L

Best Arabidopsis Sequence Match ( AT5G47720.4 )
(BLAST)

001: MAPPVSDDSL QPRDVCVVGV ARTPIGDFLG SLSSLTATRL GSIAIQAALK RAHVDPALVE EVFFGNVLTA NLGQAPARQA ALGAGIPYSV ICTTINKVCA
101: AGMKSVMLAS QSIQLGLNDI VVAGGMESMS NVPKYLPDAR RGSRLGHDTV VDGMMKDGLW DVYNDFGMGV CGEICADQYR ITREEQDAYA IQSFERGIAA
201: QNTQLFAWEI VPVEVSTGRG RPSVVIDKDE GLGKFDAAKL KKLRPSFKED GGSVTAGNAS SISDGAAALV LVSGEKALEL GLHVIAKIRG YADAAQAPEL
301: FTTTPALAIP KAIKRAGLDA SQVDYYEINE AFSVVALANQ KLLGLDPERL NAHGGAVSLG HPLGCSGARI LVTLLGVLRA KKGKYGVASI CNGGGGASAL
401: VLEFMSEKTI GYSAL

Arabidopsis Description

Probable acetyl-CoA acetyltransferase, cytosolic 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK7]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.