Factsheet for AT5G47720.4

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25950	Canola	cytosol	91.33	91.33
CDY41065	Canola	cytosol, peroxisome, plastid	91.33	91.33
Bra017469.1-P	Field mustard	plastid	89.16	85.65
KRH01946	Soybean	nucleus	79.28	80.44
KRH51203	Soybean	cytosol, mitochondrion, peroxisome	78.07	79.22
PGSC0003DMT400050843	Potato	cytosol, peroxisome, plastid	78.07	78.83
Solyc04g015100.2.1	Tomato	cytosol, peroxisome, plastid	78.07	78.83
AT5G48230.2	Thale cress	cytosol	75.66	77.92
VIT_00s0531g00050.t01	Wine grape	peroxisome	78.8	74.32
AT5G48880.2	Thale cress	mitochondrion	32.53	29.54
AT1G04710.1	Thale cress	cytosol	30.6	28.67
AT2G33150.1	Thale cress	cytosol	31.08	27.92

Protein Annotations

Gene3D:3.40.47.10	EntrezGene:834823	MapMan:9.1.1.1	UniProt:A0A178UN06	ProteinID:AED95558.1	ProteinID:AED95559.1
ProteinID:AED95560.1	ProteinID:AED95561.1	EMBL:AK316852	ArrayExpress:AT5G47720	EnsemblPlantsGene:AT5G47720	RefSeq:AT5G47720
TAIR:AT5G47720	RefSeq:AT5G47720-TAIR-G	EnsemblPlants:AT5G47720.4	TAIR:AT5G47720.4	EMBL:AY088740	ProteinID:BAB11319.1
EMBL:BT029758	GO:GO:0003674	GO:GO:0003824	GO:GO:0003985	GO:GO:0005488	GO:GO:0005575
GO:GO:0005622	GO:GO:0005623	GO:GO:0005737	GO:GO:0005829	GO:GO:0006629	GO:GO:0006635
GO:GO:0008150	GO:GO:0008152	GO:GO:0009056	GO:GO:0009987	GO:GO:0016740	GO:GO:0016746
GO:GO:0016747	GO:GO:0046872	InterPro:IPR016039	RefSeq:NP_199583.1	RefSeq:NP_851150.1	RefSeq:NP_974900.1
RefSeq:NP_974901.2	ProteinID:OAO95238.1	ProteinID:OAO95239.1	PFAM:PF00108	PFAM:PF02803	PIRSF:PIRSF000429
PO:PO:0000013	PO:PO:0000037	PO:PO:0000230	PO:PO:0000293	PO:PO:0001078	PO:PO:0001081
PO:PO:0001185	PO:PO:0004507	PO:PO:0007095	PO:PO:0007103	PO:PO:0007115	PO:PO:0007123
PO:PO:0007611	PO:PO:0007616	PO:PO:0009005	PO:PO:0009009	PO:PO:0009010	PO:PO:0009025
PO:PO:0009029	PO:PO:0009030	PO:PO:0009031	PO:PO:0009032	PO:PO:0009046	PO:PO:0009047
PO:PO:0009052	PO:PO:0020030	PO:PO:0020100	PO:PO:0020137	PO:PO:0025022	PO:PO:0025281
ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR18919	PANTHER:PTHR18919:SF131	UniProt:Q3E8F0	UniProt:Q9FIK7
SUPFAM:SSF53901	TIGRFAMs:TIGR01930	InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C
InterPro:Thiolase_CS	InterPro:Thiolase_N	UniParc:UPI00000A50CC	:	:	:

Description

Probable acetyl-CoA acetyltransferase, cytosolic 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK7]

Coordinates

chr5:+:19331626..19334277

Molecular Weight (calculated)

43294.2 Da

IEP (calculated)

6.368

GRAVY (calculated)

0.154

Length

415 amino acids

Sequence
(BLAST)

001: MAPPVSDDSL QPRDVCVVGV ARTPIGDFLG SLSSLTATRL GSIAIQAALK RAHVDPALVE EVFFGNVLTA NLGQAPARQA ALGAGIPYSV ICTTINKVCA
101: AGMKSVMLAS QSIQLGLNDI VVAGGMESMS NVPKYLPDAR RGSRLGHDTV VDGMMKDGLW DVYNDFGMGV CGEICADQYR ITREEQDAYA IQSFERGIAA
201: QNTQLFAWEI VPVEVSTGRG RPSVVIDKDE GLGKFDAAKL KKLRPSFKED GGSVTAGNAS SISDGAAALV LVSGEKALEL GLHVIAKIRG YADAAQAPEL
301: FTTTPALAIP KAIKRAGLDA SQVDYYEINE AFSVVALANQ KLLGLDPERL NAHGGAVSLG HPLGCSGARI LVTLLGVLRA KKGKYGVASI CNGGGGASAL
401: VLEFMSEKTI GYSAL

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.