CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome, plastid, cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
plastid 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, peroxisome, plastid
Any Predictor:	cytosol, peroxisome
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY25950	Canola	cytosol	98.31	98.31
Bra017469.1-P	Field mustard	plastid	97.35	93.52
AT5G47720.4	Thale cress	cytosol, peroxisome, plastid	91.33	91.33
KRH01946	Soybean	nucleus	76.87	78.0
Solyc04g015100.2.1	Tomato	cytosol, peroxisome, plastid	76.87	77.62
PGSC0003DMT400050843	Potato	cytosol, peroxisome, plastid	76.39	77.13
KRH51203	Soybean	cytosol, mitochondrion, peroxisome	75.66	76.77
CDY00071	Canola	plastid	74.22	76.43
CDY19963	Canola	plastid	74.22	76.43
CDY48742	Canola	plastid	73.73	75.93
VIT_00s0531g00050.t01	Wine grape	peroxisome	77.59	73.18
CDX86320	Canola	mitochondrion	74.22	72.47
CDX85319	Canola	mitochondrion	73.49	71.76
CDY05693	Canola	cytosol, mitochondrion, peroxisome	44.1	55.96
CDY05692	Canola	cytosol, plastid	27.95	52.97
CDY33940	Canola	cytosol	33.25	30.26
CDY05657	Canola	cytosol	33.01	29.65
CDY23766	Canola	cytosol	32.29	29.0
CDY37750	Canola	mitochondrion	32.29	29.0
CDY15520	Canola	mitochondrion	31.33	28.82
CDX86611	Canola	cytosol	31.33	28.82
CDX84701	Canola	cytosol	32.05	28.79
CDX79511	Canola	cytosol	32.05	28.79
CDY19452	Canola	cytosol	32.05	28.73
CDY17140	Canola	cytosol	31.81	28.57

Protein Annotations

Gene3D:3.40.47.10	MapMan:9.1.1.1	GO:A0A078HR78	UniProt:A0A078HR78	EnsemblPlants:CDY41065	ProteinID:CDY41065
ProteinID:CDY41065.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740
GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:GSBRNA2T00072383001	InterPro:IPR016039	PFAM:PF00108	PFAM:PF02803
PIRSF:PIRSF000429	ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR18919	PANTHER:PTHR18919:SF131	SUPFAM:SSF53901
TIGRFAMs:TIGR01930	InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS
InterPro:Thiolase_N	UniParc:UPI0001B63B42	SEG:seg	:	:	:

Description

BnaA09g18440DBnaA09g18440D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HR78]

Coordinates

chrLK032489:+:134035..136788

Molecular Weight (calculated)

42964.9 Da

IEP (calculated)

6.895

GRAVY (calculated)

0.193

Length

415 amino acids

Sequence
(BLAST)

001: MASSVSDQSV QPQDVCVVGV ARTPMGDFLG SLSSITAPRL GSIAIEAALK SANVEPALVE EVFFGNVLTA NLGQAPARQA ALGAGIPYSV ICTTVNKVCA
101: AGMKAVMLAA QSIQLGLNDV VVAGGMESMS NVPKYLPNAR RGSRLGHDTV VDGMTKDGLW DVYNDFGMGV CGEICADQYR ITREEQDAYA IQSFERGIAA
201: QNARLFSWEI VPVEVSSGRG KPSVVIDKDD GLGKFDAAKL KKLRPSFKED GGSVTAGNAS SISDGAAALV LVSGKKALEL GLHVIAKIRG YADAAQAPEL
301: FTTTPALAIP KAIMRAGLDA SQVDYYEINE AFSVVALANQ KLLGLDPARL NAHGGAVALG HPLGCSGARI LVTLLGVLKA KKGKYGVASI CNGGGGASAL
401: VLEFMSEKTI GYSSL

Best Arabidopsis Sequence Match ( AT5G47720.4 )
(BLAST)

001: MAPPVSDDSL QPRDVCVVGV ARTPIGDFLG SLSSLTATRL GSIAIQAALK RAHVDPALVE EVFFGNVLTA NLGQAPARQA ALGAGIPYSV ICTTINKVCA
101: AGMKSVMLAS QSIQLGLNDI VVAGGMESMS NVPKYLPDAR RGSRLGHDTV VDGMMKDGLW DVYNDFGMGV CGEICADQYR ITREEQDAYA IQSFERGIAA
201: QNTQLFAWEI VPVEVSTGRG RPSVVIDKDE GLGKFDAAKL KKLRPSFKED GGSVTAGNAS SISDGAAALV LVSGEKALEL GLHVIAKIRG YADAAQAPEL
301: FTTTPALAIP KAIKRAGLDA SQVDYYEINE AFSVVALANQ KLLGLDPERL NAHGGAVSLG HPLGCSGARI LVTLLGVLRA KKGKYGVASI CNGGGGASAL
401: VLEFMSEKTI GYSAL

Arabidopsis Description

Probable acetyl-CoA acetyltransferase, cytosolic 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK7]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.