CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
mitochondrion 3
cytosol 2
peroxisome 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY15520	Canola	mitochondrion	96.01	96.01
AT1G04710.1	Thale cress	cytosol	88.47	90.07
CDY19452	Canola	cytosol	87.58	85.31
CDX84701	Canola	cytosol	87.14	85.06
CDY23766	Canola	cytosol	87.14	85.06
CDY17140	Canola	cytosol	87.14	85.06
CDX79511	Canola	cytosol	86.92	84.85
CDY37750	Canola	mitochondrion	86.92	84.85
VIT_05s0051g00720.t01	Wine grape	cytosol	83.15	81.34
PGSC0003DMT400076175	Potato	cytosol	83.37	80.86
Solyc09g091470.2.1	Tomato	plastid	83.37	80.86
KRH33469	Soybean	endoplasmic reticulum, nucleus	82.71	80.56
KRG90241	Soybean	nucleus	82.26	80.48
CDY33940	Canola	cytosol	70.07	69.3
CDY05657	Canola	cytosol	68.96	67.32
CDY19963	Canola	plastid	29.93	33.5
CDY00071	Canola	plastid	29.93	33.5
CDY48742	Canola	plastid	29.49	33.0
CDX85319	Canola	mitochondrion	30.16	32.0
CDX86320	Canola	mitochondrion	29.93	31.76
CDY25950	Canola	cytosol	28.82	31.33
CDY41065	Canola	cytosol, peroxisome, plastid	28.82	31.33
CDY05693	Canola	cytosol, mitochondrion, peroxisome	21.29	29.36
CDY05692	Canola	cytosol, plastid	10.2	21.0

Protein Annotations

Gene3D:3.40.47.10	MapMan:5.7.3.2.3	GO:A0A078DBG7	EnsemblPlants:CDX86611	ProteinID:CDX86611	ProteinID:CDX86611.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00145261001	InterPro:IPR016039	PFAM:PF00108	PFAM:PF02803	PIRSF:PIRSF000429	ScanProsite:PS00098
ScanProsite:PS00099	ScanProsite:PS00737	PFscan:PS51257	PANTHER:PTHR43853	PANTHER:PTHR43853:SF4	SUPFAM:SSF53901
TIGRFAMs:TIGR01930	InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS
InterPro:Thiolase_N	InterPro:Thiolase_acyl_enz_int_AS	UniParc:UPI0004EDC8C4	SEG:seg	:	:

Description

BnaC08g00920D

Coordinates

chrLK031846:-:1070610..1073220

Molecular Weight (calculated)

47380.0 Da

IEP (calculated)

8.626

GRAVY (calculated)

-0.049

Length

451 amino acids

Sequence
(BLAST)

001: MEKAIERQRV LLHHLRPPPP SSSQASSLSV SACLAGDSAA YQRTSLYGDD VVIVAAQRTA LCKAKRGSFK DTYPDELLAP VLRAVIEKTK LNPSEVGDIV
101: VGTVLGSGSQ KATEFRMAAF YAGFPETVPI RTVNRQCSSG LQAVADVAAA IKAGFYDIGI GAGLESMTTS PRGWKGSVNP KVKKFEQAQS CLLPMGITSE
201: NVAHRFGVSR EEQDQAAVDS HRKAASATAS GKFKDEITPV NTRIVDPKTC DEKPITVSVD DGIRPSTTLS GLAKLKPVFK QDGSTTAGNS SQVSDGAGAV
301: LLMKRSVAMQ KGLPILGVFR TFAAVGVDPA VMGVGPAAAI PAAVKAAGLE LDDIDLFEIN EAFASQFVYC RNKLGLDPEK INVNGGAIAI GHPLGATGAR
401: CVATLLHEMK RRGKDCRFGV VTMCIGSGMG AAGVFERGDG VDELSNVRKV E

Best Arabidopsis Sequence Match ( AT1G04710.1 )
(BLAST)

001: MEKATERQRI LLRHLQPSSS SDASLSASAC LSKDSAAYQY GDDVVIVAAQ RTALCKAKRG SFKDTFPDEL LASVLRALIE KTNVNPSEVG DIVVGTVLGP
101: GSQRASECRM AAFYAGFPET VPIRTVNRQC SSGLQAVADV AAAIKAGFYD IGIGAGLESM TTNPRGWKGS VNPNVKKFEQ AHNCLLPMGI TSENVAHRFN
201: VSREEQDQAA VDSHRKAASA TASGKFKDEI TPVKTKIVDP KTGDEKPITV SVDDGIRPNT TLSGLAKLKP VFKEDGTTTA GNSSQLSDGA GAVLLMRRNV
301: AMQKGLPILG VFRTFSAVGV DPAIMGVGPA VAIPAAVKAA GLELNDVDLF EINEAFASQF VYCRNKLGLD AEKINVNGGA IAIGHPLGAT GARCVATLLH
401: EMKRRGKDCR FGVVSMCIGS GMGAAAVFER GGGVDELCDV RKV

Arabidopsis Description

KAT1PKT4 [Source:UniProtKB/TrEMBL;Acc:A0A178W7T5]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.