CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1
plastid 2
mitochondrion 6

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	mitochondrion, plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	mitochondrion
MultiLoc:	mitochondrion
Predotar:	mitochondrion
PProwler:	mitochondrion
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY48742	Canola	plastid	92.0	97.02
CDY19963	Canola	plastid	92.0	97.02
CDY00071	Canola	plastid	91.76	96.77
AT5G48230.2	Thale cress	cytosol	91.53	96.53
CDX86320	Canola	mitochondrion	90.59	90.59
KRH14066	Soybean	endoplasmic reticulum, nucleus	80.0	83.54
KRH74050	Soybean	endoplasmic reticulum	80.0	83.54
Solyc07g045350.2.1	Tomato	extracellular, plastid, unclear	78.59	82.67
PGSC0003DMT400044777	Potato	cytosol	78.35	82.43
VIT_12s0057g01200.t01	Wine grape	cytosol	79.76	81.69
PGSC0003DMT400028289	Potato	cytosol	77.41	81.44
Solyc05g017760.2.1	Tomato	plastid, unclear	76.71	80.1
GSMUA_Achr1P09500_001	Banana	cytosol, peroxisome, plastid	75.53	80.05
GSMUA_Achr1P16400_001	Banana	mitochondrion	71.29	79.53
TraesCS2A01G036300.1	Wheat	cytosol, mitochondrion, peroxisome	74.59	79.05
TraesCS5D01G173800.1	Wheat	cytosol	73.88	78.89
KXG39211	Sorghum	cytosol, peroxisome, plastid	74.35	78.8
TraesCS5B01G166200.2	Wheat	cytosol, mitochondrion, peroxisome	73.65	78.64
TraesCS2D01G035400.2	Wheat	cytosol	74.12	78.55
TraesCS5A01G169400.1	Wheat	cytosol, mitochondrion, peroxisome	73.41	78.39
TraesCS2B01G049200.1	Wheat	golgi	73.88	78.3
Os09t0252100-01	Rice	plastid	73.88	78.3
KXG24143	Sorghum	cytosol	73.88	78.3
Zm00001d031212_P004	Maize	cytosol, peroxisome, plastid	73.65	78.05
Zm00001d047224_P003	Maize	cytosol	66.82	77.81
GSMUA_Achr1P19180_001	Banana	peroxisome	74.35	76.89
HORVU5Hr1G052090.10	Barley	endoplasmic reticulum, vacuole	74.35	76.89
CDY41065	Canola	cytosol, peroxisome, plastid	71.76	73.49
CDY25950	Canola	cytosol	71.29	73.01
KXG32103	Sorghum	cytosol	71.29	71.97
Os01t0110400-01	Rice	cytosol	69.88	71.39
Zm00001d029416_P001	Maize	peroxisome	73.88	70.88
HORVU2Hr1G005420.1	Barley	mitochondrion, peroxisome, plastid	53.41	70.5
TraesCS3D01G005500.1	Wheat	cytosol	69.18	70.33
TraesCS3B01G008700.1	Wheat	cytosol	69.18	70.33
TraesCS3A01G003800.1	Wheat	cytosol	68.47	69.62
CDY05692	Canola	cytosol, plastid	35.53	68.95
CDY05693	Canola	cytosol, mitochondrion, peroxisome	52.47	68.2
Zm00001d008432_P003	Maize	mitochondrion	71.06	66.23
HORVU3Hr1G000760.3	Barley	peroxisome	58.12	57.58
CDY33940	Canola	cytosol	34.12	31.8
CDY05657	Canola	cytosol	34.12	31.39
CDY23766	Canola	cytosol	33.88	31.17
CDY37750	Canola	mitochondrion	33.88	31.17
CDX84701	Canola	cytosol	33.41	30.74
CDX79511	Canola	cytosol	33.18	30.52
CDY17140	Canola	cytosol	33.18	30.52
CDY19452	Canola	cytosol	33.18	30.45
CDX86611	Canola	cytosol	32.0	30.16
CDY15520	Canola	mitochondrion	32.0	30.16

Protein Annotations

Gene3D:3.40.47.10	MapMan:9.1.1.1	GO:A0A078DAK7	EnsemblPlants:CDX85319	ProteinID:CDX85319	ProteinID:CDX85319.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00142983001	InterPro:IPR016039	PFAM:PF00108	PFAM:PF02803	PIRSF:PIRSF000429	ScanProsite:PS00098
ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR18919	PANTHER:PTHR18919:SF131	SUPFAM:SSF53901	TIGRFAMs:TIGR01930
InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N
InterPro:Thiolase_acyl_enz_int_AS	UniParc:UPI0004EF197C	SEG:seg	:	:	:

Description

BnaC07g26300D

Coordinates

chrLK031841:-:1186477..1189527

Molecular Weight (calculated)

44105.3 Da

IEP (calculated)

8.124

GRAVY (calculated)

0.164

Length

425 amino acids

Sequence
(BLAST)

001: MVPLLTLYRI KSFNSMPFCR FRMAHTADSV NPREVCIVGV ARTPMGGFLG SLSSLPATKL GSVAIAAALK RANVDPSLVQ EVVFGNVLSA NLGQAPARQA
101: ALGAGIPNSV ICTTVNKVCA SGMKAVMIAA QSIQLGINDV VVAGGMESMS NTPKYLAEAR KGSRFGNDSL VDGMLKDGLW DVYNDCGMGS CAELCAEKFQ
201: ITREQQDDYA VQSFERGIAA QEAGAFTWEI VPVEVSGGRG RPSTIVDKDE GLGKFDAAKL RKLRPSFKDN GGTVTAGNAS SISDGAAALV LVSGEKALQL
301: GLKVLAKVKG YGDAAQEPEF FTTAPALAIP KAIADAGLES SQVDYYEINE AFAVVALANQ KLLGITREKV NVNGGAVSLG HPLGCSGARI LITLLGILKN
401: RNGKYGVGGV CNGGGGASAL VLELV

Best Arabidopsis Sequence Match ( AT5G48230.2 )
(BLAST)

001: MAHTSESVNP RDVCIVGVAR TPMGGFLGSL SSLPATKLGS LAIAAALKRA NVDPALVQEV VFGNVLSANL GQAPARQAAL GAGIPNSVIC TTVNKVCASG
101: MKAVMIAAQS IQLGINDVVV AGGMESMSNT PKYLAEARKG SRFGHDSLVD GMLKDGLWDV YNDCGMGSCA ELCAEKFQIT REQQDDYAVQ SFERGIAAQE
201: AGAFTWEIVP VEVSGGRGRP STIVDKDEGL GKFDAAKLRK LRPSFKENGG TVTAGNASSI SDGAAALVLV SGEKALQLGL LVLAKIKGYG DAAQEPEFFT
301: TAPALAIPKA IAHAGLESSQ VDYYEINEAF AVVALANQKL LGIAPEKVNV NGGAVSLGHP LGCSGARILI TLLGILKKRN GKYGVGGVCN GGGGASALVL
401: ELL

Arabidopsis Description

AAT1AT5G48230 protein [Source:UniProtKB/TrEMBL;Acc:B9DGQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.