Factsheet for GSMUA_Achr1P19180_001

Subcellular Localization

min:

: max

Winner_takes_all: peroxisome

Predictor Summary:

cytosol 1
peroxisome 4
mitochondrion 2
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P16400_001	Banana	mitochondrion	83.21	89.76
GSMUA_Achr1P09500_001	Banana	cytosol, peroxisome, plastid	87.35	89.53
Zm00001d031212_P004	Maize	cytosol, peroxisome, plastid	82.48	84.54
Zm00001d047224_P003	Maize	cytosol	74.94	84.38
KXG24143	Sorghum	cytosol	82.24	84.29
Os09t0252100-01	Rice	plastid	82.24	84.29
KXG39211	Sorghum	cytosol, peroxisome, plastid	81.51	83.54
TraesCS5D01G173800.1	Wheat	cytosol	80.29	82.91
TraesCS5B01G166200.2	Wheat	cytosol, mitochondrion, peroxisome	80.29	82.91
TraesCS5A01G169400.1	Wheat	cytosol, mitochondrion, peroxisome	80.29	82.91
TraesCS2D01G035400.2	Wheat	cytosol	80.29	82.29
TraesCS2B01G049200.1	Wheat	golgi	80.29	82.29
TraesCS2A01G036300.1	Wheat	cytosol, mitochondrion, peroxisome	79.56	81.55
HORVU5Hr1G052090.10	Barley	endoplasmic reticulum, vacuole	81.02	81.02
VIT_12s0057g01200.t01	Wine grape	cytosol	80.78	80.0
CDY19963	Canola	plastid	77.37	78.91
CDY00071	Canola	plastid	77.37	78.91
AT5G48230.2	Thale cress	cytosol	77.37	78.91
Bra020710.1-P	Field mustard	cytosol, plastid	76.64	78.16
CDY48742	Canola	plastid	76.64	78.16
KRH14066	Soybean	endoplasmic reticulum, nucleus	77.37	78.13
Solyc07g045350.2.1	Tomato	extracellular, plastid, unclear	76.64	77.97
PGSC0003DMT400028289	Potato	cytosol	76.4	77.72
PGSC0003DMT400044777	Potato	cytosol	76.4	77.72
KRH74050	Soybean	endoplasmic reticulum	76.89	77.64
Solyc05g017760.2.1	Tomato	plastid, unclear	76.16	76.9
Zm00001d029416_P001	Maize	peroxisome	81.51	75.62
KXG32103	Sorghum	cytosol	77.13	75.3
TraesCS3B01G008700.1	Wheat	cytosol	76.4	75.12
Bra037501.1-P	Field mustard	mitochondrion, plastid	77.62	75.06
CDX86320	Canola	mitochondrion	77.62	75.06
Os01t0110400-01	Rice	cytosol	75.67	74.76
TraesCS3D01G005500.1	Wheat	cytosol	75.91	74.64
CDX85319	Canola	mitochondrion	76.89	74.35
TraesCS3A01G003800.1	Wheat	cytosol	75.43	74.16
Bra036182.1-P	Field mustard	plastid	77.37	73.78
HORVU2Hr1G005420.1	Barley	mitochondrion, peroxisome, plastid	56.93	72.67
Zm00001d008432_P003	Maize	mitochondrion	75.43	67.98
HORVU3Hr1G000760.3	Barley	peroxisome	64.48	61.77
CDY05693	Canola	cytosol, mitochondrion, peroxisome	45.01	56.57
CDY05692	Canola	cytosol, plastid	29.44	55.25
GSMUA_AchrUn_...	Banana	extracellular	13.87	40.14
GSMUA_Achr1P15360_001	Banana	mitochondrion	33.58	30.07
GSMUA_Achr8P12850_001	Banana	cytosol	33.09	29.63
GSMUA_AchrUn_...	Banana	mitochondrion	32.6	28.94
GSMUA_Achr11P...	Banana	cytosol	32.12	28.76
GSMUA_Achr3P00300_001	Banana	mitochondrion	14.6	22.73

Protein Annotations

Gene3D:3.40.47.10	MapMan:9.1.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:GSMUA_Achr1G19180_001	EnsemblPlants:GSMUA_Achr1P19180_001	EnsemblPlants:GSMUA_Achr1T19180_001
InterPro:IPR016039	UniProt:M0S176	PFAM:PF00108	PFAM:PF02803	PIRSF:PIRSF000429	ScanProsite:PS00099
ScanProsite:PS00737	PANTHER:PTHR18919	PANTHER:PTHR18919:SF131	SUPFAM:SSF53901	TIGRFAMs:TIGR01930	InterPro:Thiolase
InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N	UniParc:UPI000296BDF2
SEG:seg	:	:	:	:	:

Description

Probable acetyl-CoA acetyltransferase, cytosolic 2 [Source:GMGC_GENE;Acc:GSMUA_Achr1G19180_001]

Coordinates

chr1:+:14330134..14339643

Molecular Weight (calculated)

42440.2 Da

IEP (calculated)

7.192

GRAVY (calculated)

0.219

Length

411 amino acids

Sequence
(BLAST)

001: MASEQIKPRD VCVVGIARTP MGGFLGALSS LSATQLGSIA IKHALARANL DPALVQEVFF GNVLSANLGQ APARQAALGA GIPNTVVCTT INKVCASGMK
101: AAMLAAQSIQ LGINDIVVAG GMESMSNAPK YIAEARKGSR FGHDTIVDGM LKDGLWDVYN DFAMGNCAEL CAVHHSITRE EQDAYAIKSN ERGIAARDSG
201: AFTWEIAPVE VSAGRGKPSV VIDKDESLEK FDPVKLRKLR PSFKENGGTV TAGNASSISD GAAALVLVSG EKALELGLQV VAKIRGYADA AQAPELFTTT
301: PALAIPKAIS SAGLEASQVD YYEINEAFSV VALANQKLLS LPSERVNVHG GAVSLGHPLG CSGARILVTL LGVLRHRSGT IGVAGVCNGG GGASALVLEL
401: VSHAGLMRSL L

Best Arabidopsis Sequence Match ( AT5G47720.4 )
(BLAST)

001: MAPPVSDDSL QPRDVCVVGV ARTPIGDFLG SLSSLTATRL GSIAIQAALK RAHVDPALVE EVFFGNVLTA NLGQAPARQA ALGAGIPYSV ICTTINKVCA
101: AGMKSVMLAS QSIQLGLNDI VVAGGMESMS NVPKYLPDAR RGSRLGHDTV VDGMMKDGLW DVYNDFGMGV CGEICADQYR ITREEQDAYA IQSFERGIAA
201: QNTQLFAWEI VPVEVSTGRG RPSVVIDKDE GLGKFDAAKL KKLRPSFKED GGSVTAGNAS SISDGAAALV LVSGEKALEL GLHVIAKIRG YADAAQAPEL
301: FTTTPALAIP KAIKRAGLDA SQVDYYEINE AFSVVALANQ KLLGLDPERL NAHGGAVSLG HPLGCSGARI LVTLLGVLRA KKGKYGVASI CNGGGGASAL
401: VLEFMSEKTI GYSAL

Arabidopsis Description

Probable acetyl-CoA acetyltransferase, cytosolic 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK7]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.