Factsheet for PGSC0003DMT400044777

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 3
peroxisome 3
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc07g045350.2.1	Tomato	extracellular, plastid, unclear	99.5	99.5
PGSC0003DMT400028289	Potato	cytosol	88.61	88.61
KRH74050	Soybean	endoplasmic reticulum	84.9	84.28
KRH14066	Soybean	endoplasmic reticulum, nucleus	84.9	84.28
VIT_12s0057g01200.t01	Wine grape	cytosol	85.89	83.61
CDY19963	Canola	plastid	83.17	83.37
CDY00071	Canola	plastid	82.92	83.13
CDY48742	Canola	plastid	82.67	82.88
Bra020710.1-P	Field mustard	cytosol, plastid	82.43	82.63
AT5G48230.2	Thale cress	cytosol	82.43	82.63
TraesCS5B01G166200.2	Wheat	cytosol, mitochondrion, peroxisome	78.96	80.15
GSMUA_Achr1P09500_001	Banana	cytosol, peroxisome, plastid	79.21	79.8
TraesCS5D01G173800.1	Wheat	cytosol	78.47	79.65
TraesCS5A01G169400.1	Wheat	cytosol, mitochondrion, peroxisome	78.47	79.65
TraesCS2B01G049200.1	Wheat	golgi	78.96	79.55
TraesCS2A01G036300.1	Wheat	cytosol, mitochondrion, peroxisome	78.96	79.55
GSMUA_Achr1P16400_001	Banana	mitochondrion	75.0	79.53
Os09t0252100-01	Rice	plastid	78.71	79.3
TraesCS2D01G035400.2	Wheat	cytosol	78.47	79.05
Bra037501.1-P	Field mustard	mitochondrion, plastid	82.67	78.59
CDX85319	Canola	mitochondrion	82.43	78.35
Bra036182.1-P	Field mustard	plastid	83.17	77.96
Zm00001d031212_P004	Maize	cytosol, peroxisome, plastid	77.23	77.81
KXG24143	Sorghum	cytosol	77.23	77.81
CDX86320	Canola	mitochondrion	81.68	77.65
HORVU5Hr1G052090.10	Barley	endoplasmic reticulum, vacuole	78.47	77.13
PGSC0003DMT400050843	Potato	cytosol, peroxisome, plastid	78.22	76.89
KXG39211	Sorghum	cytosol, peroxisome, plastid	76.24	76.81
Zm00001d047224_P003	Maize	cytosol	69.06	76.44
GSMUA_Achr1P19180_001	Banana	peroxisome	77.72	76.4
KXG32103	Sorghum	cytosol	75.5	72.45
Os01t0110400-01	Rice	cytosol	73.27	71.15
TraesCS3B01G008700.1	Wheat	cytosol	73.51	71.05
TraesCS3D01G005500.1	Wheat	cytosol	73.51	71.05
TraesCS3A01G003800.1	Wheat	cytosol	73.27	70.81
HORVU2Hr1G005420.1	Barley	mitochondrion, peroxisome, plastid	55.94	70.19
Zm00001d029416_P001	Maize	peroxisome	75.74	69.07
Zm00001d008432_P003	Maize	mitochondrion	74.75	66.23
CDY05693	Canola	cytosol, mitochondrion, peroxisome	50.0	61.77
HORVU3Hr1G000760.3	Barley	peroxisome	61.39	57.81
PGSC0003DMT400076175	Potato	cytosol	34.9	30.32
PGSC0003DMT400040876	Potato	cytosol	34.16	30.26

Protein Annotations

EntrezGene:102600847	Gene3D:3.40.47.10	MapMan:9.1.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150
GO:GO:0008152	GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	InterPro:IPR016039	UniProt:M1BGN4
PFAM:PF00108	PFAM:PF02803	EnsemblPlantsGene:PGSC0003DMG401017380	PGSC:PGSC0003DMG401017380	EnsemblPlants:PGSC0003DMT400044777	PIRSF:PIRSF000429
ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR18919	PANTHER:PTHR18919:SF131	SUPFAM:SSF53901	TIGRFAMs:TIGR01930
InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N
UniParc:UPI0002952471	RefSeq:XP_015169006.1	SEG:seg	:	:	:

Description

Cytosolic acetoacetyl-coenzyme A thiolase [Source:PGSC_GENE;Acc:PGSC0003DMG401017380]

Coordinates

chr7:-:43356038..43363006

Molecular Weight (calculated)

41328.9 Da

IEP (calculated)

6.887

GRAVY (calculated)

0.162

Length

404 amino acids

Sequence
(BLAST)

001: MAPAAADTIK PRDVCIVGVA RTPMGSFLGS LSSLPATKLG SIAIEGALKK ANVDPSLVEE VFFGNVLSAN LGQAPARQAA LGAGLPNTVV CTTVNKVCAS
101: GLKATMLAAQ SIQLGINEVV VAGGMESMSN VPKYIAEARK GSRLGHDSLV DGMLKDGLTD VYKDCGMGVC AETCAANHKI TREEQDDYAV QSFERGIAAQ
201: EAGAFAWEIV PVEVPGGRGK PSIIVDKDDG LGKFDGAKLR KLRPSFKDKD GTVTAGNASS ISDGAAALVL VSGEKAIKLG LNVIGKISGY ADAAQEPELF
301: TTAPALAIPK AIKSASLEAS QIDYYEINEA FAVVSLANQK LLGLNPEKVN VHGGAVSLGH PLGCSGARIL VTLLGVLRQK NGKYGAAGVC NGGGGASALV
401: LELV

Best Arabidopsis Sequence Match ( AT5G48230.2 )
(BLAST)

001: MAHTSESVNP RDVCIVGVAR TPMGGFLGSL SSLPATKLGS LAIAAALKRA NVDPALVQEV VFGNVLSANL GQAPARQAAL GAGIPNSVIC TTVNKVCASG
101: MKAVMIAAQS IQLGINDVVV AGGMESMSNT PKYLAEARKG SRFGHDSLVD GMLKDGLWDV YNDCGMGSCA ELCAEKFQIT REQQDDYAVQ SFERGIAAQE
201: AGAFTWEIVP VEVSGGRGRP STIVDKDEGL GKFDAAKLRK LRPSFKENGG TVTAGNASSI SDGAAALVLV SGEKALQLGL LVLAKIKGYG DAAQEPEFFT
301: TAPALAIPKA IAHAGLESSQ VDYYEINEAF AVVALANQKL LGIAPEKVNV NGGAVSLGHP LGCSGARILI TLLGILKKRN GKYGVGGVCN GGGGASALVL
401: ELL

Arabidopsis Description

AAT1AT5G48230 protein [Source:UniProtKB/TrEMBL;Acc:B9DGQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.