Factsheet for TraesCS3D01G005500.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

plastid 1
cytosol 2
mitochondrion 1
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, peroxisome, plastid
ChloroP:	plastid
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G008700.1	Wheat	cytosol	98.56	98.56
TraesCS3A01G003800.1	Wheat	cytosol	98.56	98.56
KXG32103	Sorghum	cytosol	86.12	85.51
Os01t0110400-01	Rice	cytosol	83.49	83.89
TraesCS5D01G173800.1	Wheat	cytosol	74.4	78.14
Zm00001d008432_P003	Maize	mitochondrion	85.17	78.07
GSMUA_Achr1P16400_001	Banana	mitochondrion	70.57	77.43
GSMUA_Achr1P09500_001	Banana	cytosol, peroxisome, plastid	73.44	76.56
HORVU3Hr1G000760.3	Barley	peroxisome	78.47	76.46
GSMUA_Achr1P19180_001	Banana	peroxisome	74.64	75.91
TraesCS2D01G035400.2	Wheat	cytosol	72.73	75.81
CDY00071	Canola	plastid	71.53	74.19
VIT_12s0057g01200.t01	Wine grape	cytosol	73.44	73.98
CDY19963	Canola	plastid	71.29	73.95
AT5G48230.2	Thale cress	cytosol	71.29	73.95
PGSC0003DMT400028289	Potato	cytosol	71.29	73.76
PGSC0003DMT400044777	Potato	cytosol	71.05	73.51
Solyc07g045350.2.1	Tomato	extracellular, plastid, unclear	71.05	73.51
CDY48742	Canola	plastid	70.81	73.45
Solyc05g017760.2.1	Tomato	plastid, unclear	71.29	73.22
Bra020710.1-P	Field mustard	cytosol, plastid	70.33	72.95
KRH74050	Soybean	endoplasmic reticulum	70.1	71.99
KRH14066	Soybean	endoplasmic reticulum, nucleus	69.86	71.74
CDX86320	Canola	mitochondrion	70.81	69.65
Bra037501.1-P	Field mustard	mitochondrion, plastid	70.81	69.65
Bra036182.1-P	Field mustard	plastid	71.53	69.37
CDX85319	Canola	mitochondrion	70.33	69.18
CDY05692	Canola	cytosol, plastid	28.47	54.34
CDY05693	Canola	cytosol, mitochondrion, peroxisome	40.43	51.68
TraesCS1D01G142700.1	Wheat	mitochondrion	34.45	31.24

Protein Annotations

Gene3D:3.40.47.10	MapMan:9.1.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016747	InterPro:IPR016039	PFAM:PF00108	PFAM:PF02803	PIRSF:PIRSF000429
ScanProsite:PS00098	ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR18919	PANTHER:PTHR18919:SF131	SUPFAM:SSF53901
TIGRFAMs:TIGR01930	InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS
InterPro:Thiolase_N	InterPro:Thiolase_acyl_enz_int_AS	EnsemblPlantsGene:TraesCS3D01G005500	EnsemblPlants:TraesCS3D01G005500.1	TIGR:cd00751	SEG:seg

Description

No Description!

Coordinates

chr3D:-:2147110..2150436

Molecular Weight (calculated)

43025.8 Da

IEP (calculated)

8.274

GRAVY (calculated)

0.100

Length

418 amino acids

Sequence
(BLAST)

001: MAPPPTTSAP DGGLDPRDVC VVGVARTPIG ALLGSLSSLP ATRLGSVAIQ GALRRASVDP ALVQEVFMGN VLSANLGQAP ARQAALGAGL PNTVPCTTVN
101: KVCSSGMKAV MLAAQSIQLG INDVVVAGGM ESMSNAPKYA ATARRGSRFG HDVLIDGMLK DGLWDVYNDF HMGMCAELCA DQHSITREEQ DAYAVQSNEH
201: GIAARDSGAF DWEIVPVEIP SGRGRPPVVV DKDESLAKYD PVKLKKLGPA FKKNGSVTAG NSSSISDGAA AIVLVSGEKA KNLGLQVLAR IRGYADAAQA
301: PELFTTTPAL AIPKAISNSG LRDSQIDYYE INEAFSVVAV ANQRLLGISP GKLNISGGAV SLGHPIGCSG ARIIVTLLGI LRQKQGKFGV AGVCNGGGGA
401: SAIVVESMQA SSRLRSSL

Best Arabidopsis Sequence Match ( AT5G47720.4 )
(BLAST)

001: MAPPVSDDSL QPRDVCVVGV ARTPIGDFLG SLSSLTATRL GSIAIQAALK RAHVDPALVE EVFFGNVLTA NLGQAPARQA ALGAGIPYSV ICTTINKVCA
101: AGMKSVMLAS QSIQLGLNDI VVAGGMESMS NVPKYLPDAR RGSRLGHDTV VDGMMKDGLW DVYNDFGMGV CGEICADQYR ITREEQDAYA IQSFERGIAA
201: QNTQLFAWEI VPVEVSTGRG RPSVVIDKDE GLGKFDAAKL KKLRPSFKED GGSVTAGNAS SISDGAAALV LVSGEKALEL GLHVIAKIRG YADAAQAPEL
301: FTTTPALAIP KAIKRAGLDA SQVDYYEINE AFSVVALANQ KLLGLDPERL NAHGGAVSLG HPLGCSGARI LVTLLGVLRA KKGKYGVASI CNGGGGASAL
401: VLEFMSEKTI GYSAL

Arabidopsis Description

Probable acetyl-CoA acetyltransferase, cytosolic 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK7]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.