CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plastid

Predictor Summary:

cytosol 2
plastid 4
peroxisome 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plastid
Any Predictor:	cytosol, peroxisome, plastid
BaCelLo:	cytosol
ChloroP:	plastid
iPSORT:	plastid
MultiLoc:	cytosol
PProwler:	plastid
WoLF PSORT:	plastid
YLoc:	peroxisome

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY19963	Canola	plastid	99.5	99.5
AT5G48230.2	Thale cress	cytosol	97.27	97.27
CDY48742	Canola	plastid	97.27	97.27
CDX85319	Canola	mitochondrion	96.77	91.76
CDX86320	Canola	mitochondrion	95.29	90.35
KRH14066	Soybean	endoplasmic reticulum, nucleus	85.36	84.52
KRH74050	Soybean	endoplasmic reticulum	85.36	84.52
Solyc07g045350.2.1	Tomato	extracellular, plastid, unclear	83.37	83.17
PGSC0003DMT400044777	Potato	cytosol	83.13	82.92
VIT_12s0057g01200.t01	Wine grape	cytosol	84.86	82.41
PGSC0003DMT400028289	Potato	cytosol	82.13	81.93
Solyc05g017760.2.1	Tomato	plastid, unclear	81.14	80.34
GSMUA_Achr1P16400_001	Banana	mitochondrion	75.68	80.05
GSMUA_Achr1P09500_001	Banana	cytosol, peroxisome, plastid	79.4	79.8
KXG39211	Sorghum	cytosol, peroxisome, plastid	79.4	79.8
TraesCS2A01G036300.1	Wheat	cytosol, mitochondrion, peroxisome	79.16	79.55
TraesCS5B01G166200.2	Wheat	cytosol, mitochondrion, peroxisome	78.41	79.4
Os09t0252100-01	Rice	plastid	78.91	79.3
KXG24143	Sorghum	cytosol	78.91	79.3
TraesCS5A01G169400.1	Wheat	cytosol, mitochondrion, peroxisome	78.16	79.15
Zm00001d031212_P004	Maize	cytosol, peroxisome, plastid	78.66	79.05
TraesCS2B01G049200.1	Wheat	golgi	78.66	79.05
TraesCS2D01G035400.2	Wheat	cytosol	78.66	79.05
TraesCS5D01G173800.1	Wheat	cytosol	77.92	78.89
Zm00001d047224_P003	Maize	cytosol	71.22	78.63
GSMUA_Achr1P19180_001	Banana	peroxisome	78.91	77.37
HORVU5Hr1G052090.10	Barley	endoplasmic reticulum, vacuole	78.41	76.89
CDY41065	Canola	cytosol, peroxisome, plastid	76.43	74.22
CDY25950	Canola	cytosol	75.93	73.73
KXG32103	Sorghum	cytosol	75.68	72.45
Os01t0110400-01	Rice	cytosol	74.44	72.12
TraesCS3D01G005500.1	Wheat	cytosol	74.19	71.53
TraesCS3B01G008700.1	Wheat	cytosol	74.19	71.53
HORVU2Hr1G005420.1	Barley	mitochondrion, peroxisome, plastid	56.82	71.12
Zm00001d029416_P001	Maize	peroxisome	78.16	71.11
TraesCS3A01G003800.1	Wheat	cytosol	73.45	70.81
CDY05692	Canola	cytosol, plastid	37.97	69.86
CDY05693	Canola	cytosol, mitochondrion, peroxisome	55.34	68.2
Zm00001d008432_P003	Maize	mitochondrion	75.19	66.45
HORVU3Hr1G000760.3	Barley	peroxisome	61.54	57.81
CDY33940	Canola	cytosol	35.73	31.58
CDY05657	Canola	cytosol	35.48	30.95
CDY23766	Canola	cytosol	35.24	30.74
CDY37750	Canola	mitochondrion	35.24	30.74
CDX84701	Canola	cytosol	34.74	30.3
CDX79511	Canola	cytosol	34.49	30.09
CDY17140	Canola	cytosol	34.49	30.09
CDY19452	Canola	cytosol	34.49	30.02
CDX86611	Canola	cytosol	33.5	29.93
CDY15520	Canola	mitochondrion	33.5	29.93

Protein Annotations

Gene3D:3.40.47.10	MapMan:9.1.1.1	GO:A0A078EG35	EnsemblPlants:CDY00071	ProteinID:CDY00071	ProteinID:CDY00071.1
GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152	GO:GO:0016740	GO:GO:0016747
EnsemblPlantsGene:GSBRNA2T00109563001	InterPro:IPR016039	PFAM:PF00108	PFAM:PF02803	PIRSF:PIRSF000429	ScanProsite:PS00098
ScanProsite:PS00099	ScanProsite:PS00737	PANTHER:PTHR18919	PANTHER:PTHR18919:SF131	SUPFAM:SSF53901	TIGRFAMs:TIGR01930
InterPro:Thiolase	InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N
InterPro:Thiolase_acyl_enz_int_AS	UniParc:UPI00018C6A2E	SEG:seg	:	:	:

Description

BnaC09g02300D

Coordinates

chrLK031916:+:577064..580251

Molecular Weight (calculated)

41446.9 Da

IEP (calculated)

6.886

GRAVY (calculated)

0.172

Length

403 amino acids

Sequence
(BLAST)

001: MAHSADSVNP RDVCIVGVAR TPMGGFLGSL SSLPATKLGS VAITAALKRA NVDPSLVQEV VFGNVLSANL GQAPARQAAL GAGIPNSVIC TTVNKVCASG
101: MKAVVIAAQS IQLGINDVVV AGGMESMSNT PKYLAEARKG SRFGHDFLVD GMLKDGLWDV YNDCGMGSCA ELCAEKFQIT REQQDDYAVQ SFERGIAAQE
201: AGAFTWEIVP VEVSGGRGRP STIVDKDEGL GKFDAAKLRK LRPSFKENGG TVTAGNASSI SDGAAALVLV SGEKALQLGL QVLAKIKGYG DAAQEPEFFT
301: TAPALAIPKA IAHAGLESSQ VDYYEINEAF AVVALANQKL LGISPEKVNV NGGAVSLGHP LGCSGARILI TLLGILKKRN GKYGVGGVCN GGGGASALVL
401: ELV

Best Arabidopsis Sequence Match ( AT5G48230.2 )
(BLAST)

001: MAHTSESVNP RDVCIVGVAR TPMGGFLGSL SSLPATKLGS LAIAAALKRA NVDPALVQEV VFGNVLSANL GQAPARQAAL GAGIPNSVIC TTVNKVCASG
101: MKAVMIAAQS IQLGINDVVV AGGMESMSNT PKYLAEARKG SRFGHDSLVD GMLKDGLWDV YNDCGMGSCA ELCAEKFQIT REQQDDYAVQ SFERGIAAQE
201: AGAFTWEIVP VEVSGGRGRP STIVDKDEGL GKFDAAKLRK LRPSFKENGG TVTAGNASSI SDGAAALVLV SGEKALQLGL LVLAKIKGYG DAAQEPEFFT
301: TAPALAIPKA IAHAGLESSQ VDYYEINEAF AVVALANQKL LGIAPEKVNV NGGAVSLGHP LGCSGARILI TLLGILKKRN GKYGVGGVCN GGGGASALVL
401: ELL

Arabidopsis Description

AAT1AT5G48230 protein [Source:UniProtKB/TrEMBL;Acc:B9DGQ1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.