Factsheet for GSMUA_Achr1P16400_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

cytosol 1
peroxisome 2
plastid 3
mitochondrion 3
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, peroxisome, plastid, secretory
BaCelLo:	cytosol
EpiLoc:	peroxisome
iPSORT:	plastid
MultiLoc:	mitochondrion
Plant-mPloc:	peroxisome
Predotar:	plastid
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	plastid
YLoc:	mitochondrion

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P09500_001	Banana	cytosol, peroxisome, plastid	89.24	84.79
GSMUA_Achr1P19180_001	Banana	peroxisome	89.76	83.21
Zm00001d047224_P003	Maize	cytosol	77.95	81.37
Zm00001d031212_P004	Maize	cytosol, peroxisome, plastid	84.51	80.3
TraesCS5B01G166200.2	Wheat	cytosol, mitochondrion, peroxisome	83.46	79.9
KXG24143	Sorghum	cytosol	83.99	79.8
Os09t0252100-01	Rice	plastid	83.99	79.8
TraesCS5D01G173800.1	Wheat	cytosol	82.68	79.15
TraesCS5A01G169400.1	Wheat	cytosol, mitochondrion, peroxisome	82.68	79.15
KXG39211	Sorghum	cytosol, peroxisome, plastid	82.94	78.8
TraesCS2D01G035400.2	Wheat	cytosol	82.94	78.8
TraesCS2B01G049200.1	Wheat	golgi	82.68	78.55
TraesCS2A01G036300.1	Wheat	cytosol, mitochondrion, peroxisome	82.68	78.55
HORVU5Hr1G052090.10	Barley	endoplasmic reticulum, vacuole	83.2	77.13
VIT_12s0057g01200.t01	Wine grape	cytosol	83.99	77.11
CDY19963	Canola	plastid	80.31	75.93
AT5G48230.2	Thale cress	cytosol	80.31	75.93
KRH14066	Soybean	endoplasmic reticulum, nucleus	81.1	75.92
CDY00071	Canola	plastid	80.05	75.68
CDY48742	Canola	plastid	79.79	75.43
KRH74050	Soybean	endoplasmic reticulum	80.58	75.43
Solyc07g045350.2.1	Tomato	extracellular, plastid, unclear	79.79	75.25
Bra020710.1-P	Field mustard	cytosol, plastid	79.53	75.19
PGSC0003DMT400044777	Potato	cytosol	79.53	75.0
PGSC0003DMT400028289	Potato	cytosol	79.0	74.5
Solyc05g017760.2.1	Tomato	plastid, unclear	79.53	74.45
CDX86320	Canola	mitochondrion	80.31	72.0
Bra037501.1-P	Field mustard	mitochondrion, plastid	80.05	71.76
KXG32103	Sorghum	cytosol	79.0	71.5
Zm00001d029416_P001	Maize	peroxisome	82.94	71.33
CDX85319	Canola	mitochondrion	79.53	71.29
Bra036182.1-P	Field mustard	plastid	80.05	70.77
TraesCS3D01G005500.1	Wheat	cytosol	77.43	70.57
TraesCS3B01G008700.1	Wheat	cytosol	77.43	70.57
Os01t0110400-01	Rice	cytosol	76.64	70.19
TraesCS3A01G003800.1	Wheat	cytosol	76.9	70.1
HORVU2Hr1G005420.1	Barley	mitochondrion, peroxisome, plastid	56.96	67.39
Zm00001d008432_P003	Maize	mitochondrion	78.48	65.57
HORVU3Hr1G000760.3	Barley	peroxisome	65.35	58.04
CDY05693	Canola	cytosol, mitochondrion, peroxisome	48.56	56.57
CDY05692	Canola	cytosol, plastid	29.4	51.14
GSMUA_AchrUn_...	Banana	extracellular	14.7	39.44
GSMUA_Achr8P12850_001	Banana	cytosol	34.12	28.32
GSMUA_Achr1P15360_001	Banana	mitochondrion	33.6	27.89
GSMUA_Achr11P...	Banana	cytosol	32.81	27.23
GSMUA_AchrUn_...	Banana	mitochondrion	33.07	27.21
GSMUA_Achr3P00300_001	Banana	mitochondrion	13.65	19.7

Protein Annotations

Gene3D:3.40.47.10	MapMan:9.1.1.1	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:GSMUA_Achr1G16400_001	EnsemblPlants:GSMUA_Achr1P16400_001	EnsemblPlants:GSMUA_Achr1T16400_001
InterPro:IPR016039	UniProt:M0S0E8	PFAM:PF00108	PFAM:PF02803	PIRSF:PIRSF000429	ScanProsite:PS00099
ScanProsite:PS00737	PANTHER:PTHR18919	PANTHER:PTHR18919:SF131	SUPFAM:SSF53901	TIGRFAMs:TIGR01930	InterPro:Thiolase
InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N	UniParc:UPI0002951A72
SEG:seg	:	:	:	:	:

Description

Probable acetyl-CoA acetyltransferase, cytosolic 2 [Source:GMGC_GENE;Acc:GSMUA_Achr1G16400_001]

Coordinates

chr1:-:12220924..12231825

Molecular Weight (calculated)

39484.6 Da

IEP (calculated)

6.171

GRAVY (calculated)

0.214

Length

381 amino acids

Sequence
(BLAST)

001: MGGFLGALSS LSAMQLGSMA IKYALRRANI DPALVQEVFF GNVLSANLGQ APARQAALGA GIPNTVVCTT VNKVCASGMK ATMFAAQSIE LGINDVVVAG
101: GMESMSNAPK YIAEARKGSR FGHDSLVDGM LKDGLWDVYN NVSMGICGEI CADHHSITRE EQDAYAIRSN EHGIAAQDSG AFIWEIAPIE VSAGRGRPSV
201: IIDKDESLEK FDPVKLRKLR PSFKENGGTV TAGNASSISD GAAALVLVSG EKALELGLQI IAKIRGYADA AQAPELFTTA PALAIPKAIS NAGLEASQID
301: FYEINEAFSV VALANQKLLS LPSEKVNVHG GAVSLGHPLG CSGARILVTL IGVLRERHGK VGVAAVCNGG GGASALVLEL V

Best Arabidopsis Sequence Match ( AT5G47720.4 )
(BLAST)

001: MAPPVSDDSL QPRDVCVVGV ARTPIGDFLG SLSSLTATRL GSIAIQAALK RAHVDPALVE EVFFGNVLTA NLGQAPARQA ALGAGIPYSV ICTTINKVCA
101: AGMKSVMLAS QSIQLGLNDI VVAGGMESMS NVPKYLPDAR RGSRLGHDTV VDGMMKDGLW DVYNDFGMGV CGEICADQYR ITREEQDAYA IQSFERGIAA
201: QNTQLFAWEI VPVEVSTGRG RPSVVIDKDE GLGKFDAAKL KKLRPSFKED GGSVTAGNAS SISDGAAALV LVSGEKALEL GLHVIAKIRG YADAAQAPEL
301: FTTTPALAIP KAIKRAGLDA SQVDYYEINE AFSVVALANQ KLLGLDPERL NAHGGAVSLG HPLGCSGARI LVTLLGVLRA KKGKYGVASI CNGGGGASAL
401: VLEFMSEKTI GYSAL

Arabidopsis Description

Probable acetyl-CoA acetyltransferase, cytosolic 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9FIK7]
SUBAcon: [peroxisome,plastid,cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.