Factsheet for GSMUA_AchrUn_randomP04240_001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 1
peroxisome 3
mitochondrion 4
cytosol 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr1P15360_001	Banana	mitochondrion	90.28	91.07
GSMUA_Achr3P00300_001	Banana	mitochondrion	49.03	85.98
Os02t0817700-02	Rice	extracellular	80.35	83.04
GSMUA_Achr8P12850_001	Banana	cytosol	81.86	82.57
Zm00001d018487_P001	Maize	plasma membrane	81.64	82.0
KXG31361	Sorghum	endoplasmic reticulum, extracellular, golgi, mitochondrion, peroxisome, plasma membrane, plastid, vacuole	80.13	80.13
TraesCS6B01G432600.1	Wheat	mitochondrion	78.4	78.91
TraesCS6A01G392400.2	Wheat	mitochondrion	78.83	78.49
Zm00001d049882_P001	Maize	cytosol, peroxisome, plastid	25.27	76.47
HORVU6Hr1G091130.12	Barley	mitochondrion	75.59	75.92
GSMUA_Achr11P...	Banana	cytosol	74.73	75.38
Zm00001d031930_P001	Maize	cytosol	31.97	69.48
Zm00001d003312_P001	Maize	mitochondrion, peroxisome, plastid	31.97	59.44
GSMUA_Achr1P16400_001	Banana	mitochondrion	27.21	33.07
GSMUA_Achr1P09500_001	Banana	cytosol, peroxisome, plastid	28.29	32.67
GSMUA_Achr1P19180_001	Banana	peroxisome	28.94	32.6
GSMUA_AchrUn_...	Banana	extracellular	5.83	19.01

Protein Annotations

Gene3D:3.40.47.10	MapMan:5.7.3.2.3	GO:GO:0003674	GO:GO:0003824	GO:GO:0008150	GO:GO:0008152
GO:GO:0016740	GO:GO:0016746	GO:GO:0016747	EnsemblPlantsGene:GSMUA_AchrUn_randomG04240_001	EnsemblPlants:GSMUA_AchrUn_randomP04240_001	EnsemblPlants:GSMUA_AchrUn_randomT04240_001
InterPro:IPR016039	UniProt:M0U686	PFAM:PF00108	PFAM:PF02803	ScanProsite:PS00098	ScanProsite:PS00099
ScanProsite:PS00737	PANTHER:PTHR43853	PANTHER:PTHR43853:SF4	SUPFAM:SSF53901	TIGRFAMs:TIGR01930	InterPro:Thiolase
InterPro:Thiolase-like	InterPro:Thiolase_AS	InterPro:Thiolase_C	InterPro:Thiolase_CS	InterPro:Thiolase_N	InterPro:Thiolase_acyl_enz_int_AS
UniParc:UPI000295AEF4	SEG:seg	:	:	:	:

Description

3-ketoacyl-CoA thiolase 2, peroxisomal [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG04240_001]

Coordinates

chrchrUn_random:-:17965189..17970895

Molecular Weight (calculated)

48713.4 Da

IEP (calculated)

8.404

GRAVY (calculated)

-0.040

Length

463 amino acids

Sequence
(BLAST)

001: MEKAIDRQRV LLRHLRPSPS SSPNGSHLIS ASVCAAGDSA AYQRNSCFGD DVVVVAAYRT AICKSKRGGF KDTYPEELLT VVLKALLDKT NLNPNEVGDI
101: VVGTVLAPGA QRATECRMAA FYAGFPETVP VRTVNRQCSS GLQAVADVAA AIKSGFYDIG IGAGLESMTT NSMSWDGSIN PKVNAFQQAQ NCLLPMGITS
201: ENVAHRYGVT RQEQDQAAVN SHRKAAAATA AGKFKEEIIP VTTKIVDPKT GEEKQVTISV DDGIRPETSI SSLAKLKPVF KKDGSTTAGN SSQVSDGAGA
301: VLLMRRDVAM QNGFPILGVF RSFAAVGVDP AVMGVGPAVA IPAAVKSAGL QIEDIDLFEI NEAFASQFVY CCKKLELDAT KVNVNGGAIA LGHPLGATGA
401: RSVSTLLNEM KRRGKDCRLG VISMCIGTGM GAAAVFERGD ATDGLTNARR MQSHNLLSKD AIS

Best Arabidopsis Sequence Match ( AT2G33150.1 )
(BLAST)

001: MEKAIERQRV LLEHLRPSSS SSHNYEASLS ASACLAGDSA AYQRTSLYGD DVVIVAAHRT PLCKSKRGNF KDTYPDDLLA PVLRALIEKT NLNPSEVGDI
101: VVGTVLAPGS QRASECRMAA FYAGFPETVA VRTVNRQCSS GLQAVADVAA AIKAGFYDIG IGAGLESMTT NPMAWEGSVN PAVKKFAQAQ NCLLPMGVTS
201: ENVAQRFGVS RQEQDQAAVD SHRKAAAATA AGKFKDEIIP VKTKLVDPKT GDEKPITVSV DDGIRPTTTL ASLGKLKPVF KKDGTTTAGN SSQVSDGAGA
301: VLLMKRSVAM QKGLPVLGVF RTFAAVGVDP AIMGIGPAVA IPAAVKAAGL ELDDIDLFEI NEAFASQFVY CRNKLGLDPE KINVNGGAMA IGHPLGATGA
401: RCVATLLHEM KRRGKDCRFG VVSMCIGTGM GAAAVFERGD GVDELRNARK VEAQGLLSKD AR

Arabidopsis Description

PED1PKT3 [Source:UniProtKB/TrEMBL;Acc:A0A178VRP9]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.